X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhelp%2Fhtml%2Freleases.html;h=7890985c93248c3e64bf9485bf9dd02e66c71abe;hb=42401d5ee539543588d95c50b018f486ef0855e0;hp=cc6b1f9e6bfb967b8210382e665ce510024802a0;hpb=61dec3a82c35ad8c57a208d769b3725de78136cf;p=jalview.git
diff --git a/help/help/html/releases.html b/help/help/html/releases.html
index cc6b1f9..7890985 100755
--- a/help/help/html/releases.html
+++ b/help/help/html/releases.html
@@ -57,41 +57,51 @@ li:before {
2.11.1.0
- 25/2/2020 |
+ id="Jalview.2.11.1">2.11.1.0
+ 27/03/2020
- - Feature attributes from VCF files can be exported and re-imported as GFF3 files
+
-
+ Option to show 'virtual' codon features on protein (or vice versa)
+
+ -
+ Option to export virtual features if shown
-
- Record "fixed column" values POS,
- ID, QUAL, FILTER from VCF as Feature Attributes
+ Option to transfer virtual features to Chimera
-
- More robust VCF numeric data field
- validation while parsing (e.g. AF* attributes)
+ Feature attributes from VCF files can be exported and re-imported as GFF3 files
-
- Font anti-aliasing in alignment views
- enabled by default
+ Capture VCF "fixed column" values POS,
+ ID, QUAL, FILTER as Feature Attributes
-
-
+ More robust VCF numeric data field validation while parsing
+ -
+ Feature Settings dialog keeps same screen position if reopened
+
+ -
+ Font anti-aliasing in alignment views enabled by default
+
Jalview Installer
-
+
-
Versions for install4j and getdown and installer template version reported
in console (may be null when Jalview launched as executable jar or via conda)
-
Layout improvements for OSX .dmg Finder and higher quality background images
-
+
-
- New installer/application launcher generated with install4j 8.0.4
+ New installer/application launcher generated with install4j 8.0.4
- - Jalview File Associations shown for Unix Platforms
- - Improved defaults for maximum memory setting when running on large memory machines
+ -
+ Jalview File Associations shown for Unix Platforms
+ -
+ Improved defaults for maximum memory setting when running on large memory machines
Release processes
-
@@ -106,18 +116,15 @@ li:before {
Test code included in Clover coverage
report
- Deprecations
+
|
-
-
-
- -
- ID margin for CDS and Protein views not equal when split frame is first opened
+ ID margins for CDS and Protein views not equal when split frame is first opened
-
- Sequence position numbers in status bar not correct after editing a sequence's start position via GUI
+ Sequence position numbers in status bar not correct after editing a sequence's start position
-
Alignment is misaligned in wrapped mode
@@ -141,26 +148,35 @@ li:before {
feature settings dialog also selects columns
-
- SpinnerNumberModel causing
+ SpinnerNumberModel causes
IllegalArgumentException in some circumstances
-
+ Multiple feature settings dialogs can be opened for a view
+
+ -
+ Feature Settings dialog is orphaned if alignment window is closed
+
+ -
Credits missing some authors in Jalview
help documentation for 2.11.0 release
Java 11 Compatibility issues
-
- OSX - Can't view results in PDB/Uniprot FTS
+ OSX - Can't view some search results in PDB/Uniprot search panel
Installer
- - Jalview does not automatically create file associations for 3D structure files (.pdb, .mmcif. .cif)
+ - Jalview should not create file associations for 3D structure files (.pdb, .mmcif. .cif)
+
Repository and Source Release
-
- removed redundant .gitignore files from
- repository
+ removed obsolete .cvsignore files from repository
+
+ -
+ Clover report generation running out of memory
New Known Issues
@@ -176,7 +192,7 @@ li:before {
enabled
- Jalview Installation type always reports 'Source' in console output.
+ Jalview Installation type always reports 'Source' in console output
|