X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Fcalculations%2Ftreeviewer.html;h=514b8c85bc46ee389a08f7b741676efb4cdf0de0;hb=6403068c0c328cfb63af451f7fa1bd568fa0fdd3;hp=32db2ceccc66d951cdf06f682951a32828343525;hpb=02a01a05117bb0dc0f09222aba2e63b012b3dbee;p=jalview.git

diff --git a/help/html/calculations/treeviewer.html b/help/html/calculations/treeviewer.html
index 32db2ce..514b8c8 100755
--- a/help/html/calculations/treeviewer.html
+++ b/help/html/calculations/treeviewer.html
@@ -76,8 +76,8 @@ the tree. Tree imported from outside may also contain bootstrap information,
 and additional leaves from sequences not present in the associated
 alignment.
 </p>
-<p>The view menu contains options controlling the way a tree is
-rendered and labelled:
+<p>The view menu mostly contains options controlling the way a tree is
+rendered and labeled:
 <ul>
 <li><strong>Fit to Window</strong><p>
 The tree layout will be scaled to fit in the  display
@@ -99,12 +99,19 @@ Toggles the display of a '*' at the beginning of a leaf label to
 indicate that there is no sequence corresponding to that leaf in the
 associated alignment.
 </p></li>
-<li><strong>Associate Leaves with ...</strong><p>
-Only visible when there are <a href="../features/multipleviews.html">multiple views</a> of the same
-alignment to show and edit which alignment views are associated with
-the leaves of the displayed tree.
-</p>
-</ul>
+		<li><strong>Sort Alignment By Tree</strong>
+		<p>
+				Sorts any associated alignment views using the current tree. (<em>Only
+					available in the Jalview Desktop</em>)
+			</p>
+		</li>
+		<li><strong>Associate Leaves with ...</strong>
+		<p>
+				Only visible when there are <a href="../features/multipleviews.html">multiple
+					views</a> of the same alignment to show and edit which alignment views
+				are associated with the leaves of the displayed tree.
+			</p>
+	</ul>
 </p>
 </body>
 </html>