BioJS MSA Viewer Export

X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Ffeatures%2Fbiojsmsa.html;fp=help%2Fhtml%2Ffeatures%2Fbiojsmsa.html;h=0000000000000000000000000000000000000000;hb=4f77328104498504339216829abf5ea87e2791ec;hp=f3b68162d4a74b5912e0691ba2b3c373b567d9c3;hpb=2b8c0785318a3528e1876e8e2dd48b7d831eae69;p=jalview.git diff --git a/help/html/features/biojsmsa.html b/help/html/features/biojsmsa.html deleted file mode 100644 index f3b6816..0000000 --- a/help/html/features/biojsmsa.html +++ /dev/null @@ -1,58 +0,0 @@ - - -BioJS MSA Viewer Export - -

- Exporting Alignments for viewing with the BioJS MSA - Viewer -

- Since Jalview 2.9, HTML files can be generated from an alignment - within the Jalview desktop application that show the alignment in an - interactive viewer called 'BioJS-MSA'. These pages embed Jalview's - alignment data as BioJSON, which - can be imported back into Jalview, and also interpreted by the BioJS - MSA viewer. The BioJS MSA Viewer is a full-featured JavaScript based - multiple sequence alignment visualisation system created by a - community of biological data visualisation developers, and is - developed independently of Jalview. -

- To find out more about the BioJS MSA Viewer, please go to http://msa.biojs.net/. -

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- Making sure your BioJS MSA export uses the latest - BioJS MSA Viewer -

In order to allow Jalview to export data with the latest - version of the MSA viewer, the Jalview Desktop will download - templates for HTML export from our public GitHub Repository. - Normally, this should happen without you needing to do anything, but - if you do encounter problems, then please get in contact via the - jalview-discuss mailing list, or file a bug report.

Templates are downloaded to a directory called - '.biojs_templates' in your user's home storage space (e.g. - ~/.biojs_templates).

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