X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Ffeatures%2Fsearch.html;fp=help%2Fhtml%2Ffeatures%2Fsearch.html;h=69f3315a7ae59f338b4abdcc94d62e09fe6d4ae6;hb=2595e9d4ee0dbbd3406a98c4e49a61ccde806479;hp=97667827c06b5e1d747d4073088bcb64fd4f25fa;hpb=e20075ba805d744d7cc4976e2b8d5e5840fb0a8d;p=jalview.git diff --git a/help/html/features/search.html b/help/html/features/search.html index 9766782..69f3315 100755 --- a/help/html/features/search.html +++ b/help/html/features/search.html @@ -65,6 +65,19 @@ td { Settings" under the "View" menu to change the visibility and colour of the new sequence feature.

+

+ Selecting regions from Search Results +

+

+ Press 'B' or use the Select Highlighted Columns option from + the alignment window's select menu to add columns containing + highlighted search results to the alignment window's column + selection. Alt-'B' will add all but the highlighted columns, and + Ctrl (or Cmd) -B will toggle the column selection for the + highlighted region. +

+

+ A quick Regular Expression Guide

A regular expression is not just a simple text query - although @@ -73,7 +86,7 @@ td { the match. For example, a simple query like "ACDED" would match all occurences of that string, but "ACD+ED" matches both 'ACDDED' and 'ACDDDDDDDDED'. More usefully, the query - "[ILGVMA]{;5,}" would find stretches of small, hydrophobic + "[GVATC]{;5,}" would find stretches of small, hydrophobic amino acids of at least five residues in length.

The table below describes some of the regular expression syntax: