X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Fmenus%2Falwcalculate.html;fp=help%2Fhtml%2Fmenus%2Falwcalculate.html;h=10b5611d8a8f938695115feb299d857cf3c35483;hb=81dc22411a15b2afb62ef80124db37479c5e764f;hp=50bb37b0f6489f22a53c546140298110c3cb56af;hpb=02615f4ca92570e571d166aeb8d9c0bf6531424d;p=jalview.git
diff --git a/help/html/menus/alwcalculate.html b/help/html/menus/alwcalculate.html
index 50bb37b..10b5611 100755
--- a/help/html/menus/alwcalculate.html
+++ b/help/html/menus/alwcalculate.html
@@ -83,14 +83,14 @@
annotation which can then be used to sort the alignment via the Sort
by→Score menu.
Translate as cDNA (not applet)
This option is visible for nucleotide alignments.
- Selecting this option shows the DNA's calculated protein product in a new window. Note that the
+ Selecting this option shows the DNA's calculated protein product in a new split frame window. Note that the
translation is not frame- or intron-aware; it simply translates all codons in each sequence, using the
standard genetic code (any incomplete final codon is discarded).
You can perform this action on the whole alignment,
or selected rows, columns, or regions.
Get Cross-References (not applet)
This option is visible where sequences have cross-references to
other standard databases; for example, an EMBL entry may have cross-references to one or more UNIPROT entries.
- Select the database to view all cross-referenced sequences in a new window.
+ Select the database to view all cross-referenced sequences in a new split frame window.
Autocalculate Consensus
For
large alignments it can be useful to deselect "Autocalculate
Consensus" when editing. This prevents the sometimes lengthy