X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Fmenus%2Falwfile.html;h=57ffa08525b7c870ad2a09a5efcdc419f06d85bf;hb=58ecc1bd5b01acd8f8378980f369003da9db2ee9;hp=b8445afa40b7d82f3da46c9f0508d57355583306;hpb=37de9310bec3501cbc6381e0c3dcb282fcaad812;p=jalview.git

diff --git a/help/html/menus/alwfile.html b/help/html/menus/alwfile.html
index b8445af..57ffa08 100755
--- a/help/html/menus/alwfile.html
+++ b/help/html/menus/alwfile.html
@@ -129,6 +129,13 @@
           features</a> or <a href="../features/annotationsFormat.html">alignment
           annotations</a>.
     </em></li>
+    <li><strong>Load VCF File<br>
+    </strong><em>Load VCF annotations from a plain text or tab-indexed file.
+    <br>This option is offered for nucleotide alignments, and requires at least one
+    sequence to have known genomic coordinates.
+    <br>Genomic coordinates are attached to entries retrieved from Ensembl.
+    <br>Support for VCF was added in Jalview 2.11.
+    </em></li>
     <li><strong>Close (Control W)</strong><br> <em>Close
         the alignment window. Make sure you have saved your alignment
         before you close - either as a Jalview project or by using the <strong>Save