X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Freleases.html;h=3ac124735d0c6e43ef15fba8f73abcae43bb9e4a;hb=467143528dc7d1faa241907f53ff7f8c9f4388e8;hp=abbc891a49985fb59ba26522cf90a1c449e90172;hpb=855b35ae3bdf9846900555b5ef284af053b85eb1;p=jalview.git
diff --git a/help/html/releases.html b/help/html/releases.html
index abbc891..3ac1247 100755
--- a/help/html/releases.html
+++ b/help/html/releases.html
@@ -70,11 +70,47 @@ li:before {
- 2.11.0
- 29/01/2019
+ 2.11
+ 14/05/2019 (final due date !)
|
+
+ -
+ Principal Components Analysis and
+ Viewer state is saved in Jalview Project
The 'Change
+ parameters' option has also been removed from the PCA
+ viewer.
+
+ -
+ More efficient creation of selections and
+ multiple groups when working with large alignments
+
+ -
+ Speedier import of annotation rows when
+ parsing stockholm files
+
+ -
+ Update of Ensembl Rest Client to API v9.0
+
+ -
+ Sequence features can be filtered and
+ shaded according to any associated attributes (e.g. variant
+ attributes from VCF file, or key-value pairs imported from
+ column 9 of GFF file)
+
+ -
+ More efficient sequence feature render
+ algorithm (Z-sort/transparency and filter aware)
+
+ -
+ Alignment Overview now by default shows
+ only visible region of alignment (this can be changed in
+ user preferences)
+
+ -
+
+
Deprecations
-
@@ -84,14 +120,50 @@ li:before {
Release Processes
- - Atlassian Bamboo continuous integration server for unattended Test Suite execution
- - Memory test suite to detect leaks in common operations
+ - Atlassian Bamboo continuous integration server for
+ unattended Test Suite execution
+ -
+ Memory test suite to detect leaks in common
+ operations
+
+ -
+ IntervalStoreJ (new updatable NCList
+ implementation) used for Sequence Feature collections
+
+ -
+ Castor library for XML marshalling and
+ unmarshalling has been replaced by JAXB for Jalview projects
+ and XML based data retrieval clients
+
+ -
+
+
|
-
+ Warning of 'Duplicate entry' when saving
+ Jalview project involving multiple views
+
+ -
+ Overview for complementary view in a linked
+ CDS/Protein alignment is not updated when Hide Columns by
+ Annotation dialog hides columns
+
+ -
+ Selection highlighting in the complement of
+ a CDS/Protein alignment stops working after making a
+ selection in one view, then making another selection in the
+ other view.
+
+ - Annotations tooltip changes beyond visible columns
+ -
+ Table Columns could be re-ordered in
+ Feature Settings and Jalview Preferences panels
+
+ -
Jalview hangs when closing windows
or the overview updates with large alignments.
@@ -100,6 +172,10 @@ li:before {
region if columns were selected by dragging right-to-left
and the mouse moved to the left of the first column.
+ -
+ Error message for trying to load in invalid
+ URLs doesn't tell users the invalid URL
+
Editing
@@ -114,9 +190,6 @@ li:before {
removed (Known defect since 2.10)
-
- Avoided use of apostrophe in dialog box
-
- -
@@ -126,6 +199,7 @@ li:before {
Nonpositional features lose feature group
on export as jalview features file
+ Input Data menu entry is greyed out when PCA View is restored from a Jalview 2.11 project
|