X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2FwhatsNew.html;h=1e4fbd027c8271596dca041d4cba79eb5b951432;hb=750c116fd45133a73acd57639c8a4bdbce57578d;hp=9cf104448573dad93b68333cd48a1b1c87a1a4d1;hpb=7cf8d0f6898e8b367aac3e11e6212ed677785eaf;p=jalview.git diff --git a/help/html/whatsNew.html b/help/html/whatsNew.html index 9cf1044..1e4fbd0 100755 --- a/help/html/whatsNew.html +++ b/help/html/whatsNew.html @@ -24,37 +24,46 @@

- What's new in Jalview 2.10.3 ? -

- Version 2.10.3 was released in November 2017. The full list of - bug fixes and new features can be found in the 2.10.3 Release Notes, but - the highlights are below. + What's new in Jalview 2.10.5 ?

Jalview 2.10.5 is a minor release that includes critical + patches for users working with Ensembl, and RNA secondary structure + annotation.

Faster import and more responsive UI when working with wide alignments and handling hundreds and thousands of sequence features
-
Improved usability with PDB and - UniProt Free Text Search - dialog, and new tab for retrieval of sequences for lists of IDs.
Jalview's default memory limit increased to 1G. If you have + problems starting Jalview 2.10.5 and you have 1G or less + physical memory on your machine, you will need to reduce the memory allocated to + Jalview. +
EPS, PNG and SVG export now includes hidden sequence + markers, and representative sequences are marked in bold.
Ensembl Client updated for Ensembl Rest API v7.
The + latest Ensembl API is not backwards compatible with earlier + versions of Jalview, so if you require Ensembl functionality you + will need to install this release. +
Improved support for VIENNA extended dot-bracket notation + for RNA secondary structure
Positional and selected region highlighting in VARNA + 'trimmed sequence' view now more reliable

- Experimental Features + The full list of bugs fixed in this release can be found in the 2.10.5 Release Notes. The + majority of improvement in 2.10.5 are due to Jalview users + contacting us via the jalview-discuss email list. Thanks to everyone + who took the time to do this !

- This release of Jalview introduces an Experimental Features - option in the Jalview Desktop's Tools menu that allows you - to try out features that are still in development. To access the - experimental features below - first enable the Tools→Enable - Experimental Features option, and then restart Jalview. + Jalview and Java 10

Annotation transfer between Chimera and Jalview
Two - new entries in - the Chimera viewer's Chimera menu allow positional annotation to - be exchanged between Chimera and Jalview.

- +

This release addresses a critical bug for OSX users who are + running Jalview with Java 10 which can prevent files being saved + correctly through the 'Save As' dialog box.

The 'Save As' dialog for Jalview's Groovy Console remains + affected: the workaround is to create a new file outside of Jalview + and then select it when saving your groovy script. We hope to + address this in the next major release.