X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2FwhatsNew.html;h=248db1af7a77eccfc826a3f7e92696e67d4e2383;hb=918faab51fdcb2ff14958e5ca46ba75b73d17991;hp=d7a93c663053851d95c262190701a55b69229d6d;hpb=68ba1a55efa08e12e4381bb0e5bdcb70318e1dd5;p=jalview.git diff --git a/help/html/whatsNew.html b/help/html/whatsNew.html index d7a93c6..248db1a 100755 --- a/help/html/whatsNew.html +++ b/help/html/whatsNew.html @@ -24,16 +24,53 @@

- What's new ? + What's new in Jalview 2.10.5 ?

Jalview 2.10.5 is a minor release that includes critical + patches for users working with Ensembl, and RNA secondary structure + annotation.

Jalview's default memory limit increased to 1G. If you have + problems starting Jalview 2.10.5 and you have 1G or less + physical memory on your machine, you will need to reduce the memory allocated to + Jalview. +
EPS, PNG and SVG export now includes hidden sequence + markers, and representative sequences are marked in bold.
Ensembl Client updated for Ensembl Rest API v7.
The + latest Ensembl API is not backwards compatible with earlier + versions of Jalview, so if you require Ensembl functionality you + will need to install this release. +
Improved support for VIENNA extended dot-bracket notation + for RNA secondary structure
Positional and selected region highlighting in VARNA + 'trimmed sequence' view now more reliable

- Jalview 2.9.1 is the next major release in the Jalview 2.9 series. Full details are in the - Jalview 2.9.1 Release Notes. + The full list of bugs fixed in this release can be found in the 2.10.5 Release Notes. The + majority of improvement in 2.10.5 are due to Jalview users + contacting us via the jalview-discuss email list. Thanks to everyone + who took the time to do this !

- Highlights in Jalview 2.9.1 + Jalview and Java 10 +

This release addresses a critical bug for OSX users who are + running Jalview with Java 10 which can prevent files being saved + correctly through the 'Save As' dialog box.

+ Known Issues

OSX: The 'Save As' dialog for Jalview's Groovy Console + remains affected: the workaround is to create a new file outside + of Jalview and then select it when saving your groovy script. We + hope to address this in the next major release.
OSX: JalviewÂ only displays old news feed items
OSX: Users may have to manually configure a web browser + helper application ('/usr/bin/open' can be used in the Connections + Preferences panel to open URLs with your default browser).