X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fmarkdown%2Freleases%2Frelease-2_11_3_0.md;h=2365cf30ac2e06c53ae7cd3277719d10d11e9d46;hb=e93bc0a7b2def06392a2f6b0f563c1e07fb917a1;hp=b51f46341b311e3e0198a4ae9c7ad8fb4bbc9de7;hpb=ce2818d5561e02b79b10eea326e8d448df9f2143;p=jalview.git diff --git a/help/markdown/releases/release-2_11_3_0.md b/help/markdown/releases/release-2_11_3_0.md index b51f463..2365cf3 100644 --- a/help/markdown/releases/release-2_11_3_0.md +++ b/help/markdown/releases/release-2_11_3_0.md @@ -21,7 +21,9 @@ channel: "release" - Highlight aligned positions on all associated structures when mousing over a column - sequence descriptions are updated from database reference sources if not already defined +- Visible adjuster marks to grab and adjust annotation panel height and id width +- Command line options and configurable bitmap export preferences for height, width and scale factor ### Improved support for working with computationally determined models @@ -48,6 +50,11 @@ channel: "release" ### Other improvements + +- Secondary structure annotation glyphs are rendered anti-aliasing when enabled +- Helix and Sheet glyphs vertically centered with respect to grey coil secondary structure annotation track +- Lower line of the sequence group border does not align with vertical and background residue box +- Updated JFreeSVG (https://www.jfree.org/jfreesvg) from 2.1 to 3.4.3 - Name of alignment and view included in overview window's title - "add reference annotation" add all positions in reference annotation tracks, not just positions in the currently highlighted columns/selection range - EMBL-EBI SIFTS file downloads now use split directories @@ -75,6 +82,7 @@ known issue ? 'Reload' for a jalview project results in all wi - Create separate gradle test task for some tests - Allow gradle build to create suffixed DEVELOP-... builds with channel appbase +- Jalview bio.tools description maintained under jalview's git repo and bundled with source release ## Issues Resolved - Jmol view not always centred on structures when multiple structures are viewed @@ -100,7 +108,7 @@ known issue ? 'Reload' for a jalview project results in all wi - Cannot cancel structure view open action once it has been started via the structure chooser dialog - Example project's multiple views do not open in distinct locations when eXpand views is used to show them all separately - Missing last letter when copying consensus sequence from alignment if first column is hidden - +- Last sequence ID in alignment not shown and annotation labels are misaligned in HTML export