X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=resources%2Flang%2FMessages.properties;h=6b56f079af13ffe3404e29c17cd062fecb7afd35;hb=16d109024847af92482237e43f99b82fd997451a;hp=35ead5e5450cb02cf3275b2da0657b0b0b1b766f;hpb=9feb54a4d32293b760afcdc29672fb6a880c6cbb;p=jalview.git diff --git a/resources/lang/Messages.properties b/resources/lang/Messages.properties index 35ead5e..6b56f07 100644 --- a/resources/lang/Messages.properties +++ b/resources/lang/Messages.properties @@ -30,6 +30,7 @@ action.minimize_associated_windows = Minimize Associated Windows action.close_all = Close all action.load_project = Load Project action.save_project = Save Project +action.save_project_as = Save Project as... action.quit = Quit action.expand_views = Expand Views action.gather_views = Gather Views @@ -118,10 +119,8 @@ action.select = Select action.new_view = New View action.close = Close action.add = Add -action.save_as_default = Save as default action.save_as = Save as... action.save = Save -action.cancel_fetch = Cancel Fetch action.change_font = Change Font action.change_font_tree_panel = Change Font (Tree Panel) action.colour = Colour @@ -140,7 +139,6 @@ action.fetch_db_references = Fetch DB References action.view_flanking_regions = Show flanking regions label.view_flanking_regions = Show sequence data either side of the subsequences involved in this alignment label.structures_manager = Structures Manager -label.nickname = Nickname: label.url = URL label.url\: = URL: label.input_file_url = Enter URL or Input File @@ -162,7 +160,6 @@ label.current_parameter_set_name = Current parameter set name: label.service_action = Service Action: label.post_url = POST URL: label.url_suffix = URL Suffix -label.sequence_source = Sequence Source label.per_seq = per Sequence label.result_vertically_separable = Results are vertically separable label.amend = Amend @@ -172,10 +169,9 @@ label.principal_component_analysis = Principal Component Analysis label.average_distance_identity = Average Distance Using % Identity label.neighbour_joining_identity = Neighbour Joining Using % Identity label.choose_calculation = Choose Calculation -label.treecalc_title = {0} Using {1} +label.calc_title = {0} Using {1} label.tree_calc_av = Average Distance label.tree_calc_nj = Neighbour Joining -label.select_score_model = Select score model label.score_model_pid = % Identity label.score_model_blosum62 = BLOSUM62 label.score_model_pam250 = PAM 250 @@ -203,6 +199,7 @@ label.colourScheme_purine/pyrimidine = Purine/Pyrimidine label.colourScheme_nucleotide = Nucleotide label.colourScheme_t-coffee_scores = T-Coffee Scores label.colourScheme_rna_helices = By RNA Helices +label.colourScheme_sequence_id = Sequence ID Colour label.blc = BLC label.fasta = Fasta label.msf = MSF @@ -242,7 +239,6 @@ label.documentation = Documentation label.about = About... label.show_sequence_limits = Show Sequence Limits action.feature_settings = Feature Settings... -label.feature_settings = Feature Settings label.all_columns = All Columns label.all_sequences = All Sequences label.selected_columns = Selected Columns @@ -267,6 +263,7 @@ label.use_rnaview = Use RNAView for secondary structure label.autoadd_secstr = Add secondary structure annotation to alignment label.autoadd_temp = Add Temperature Factor annotation to alignment label.structure_viewer = Default structure viewer +label.double_click_to_browse = Double-click to browse for file label.chimera_path = Path to Chimera program label.chimera_path_tip = Jalview will first try any path entered here, else standard installation locations.
Double-click to browse for file. label.invalid_chimera_path = Chimera path not found or not executable @@ -274,6 +271,7 @@ label.chimera_missing = Chimera structure viewer not found.
Please enter the label.chimera_failed = Error opening Chimera - is it installed?\nCheck path in Preferences, Structure label.min_colour = Minimum Colour label.max_colour = Maximum Colour +label.no_colour = No Colour label.use_original_colours = Use Original Colours label.threshold_minmax = Threshold is min/max label.represent_group_with = Represent Group with {0} @@ -281,8 +279,9 @@ label.selection = Selection label.group_colour = Group Colour label.sequence = Sequence label.view_pdb_structure = View PDB Structure -label.min = Min: -label.max = Max: +label.min_value = Min value +label.max_value = Max value +label.no_value = No value label.new_feature = New Feature label.match_case = Match Case label.view_alignment_editor = View in alignment editor @@ -351,7 +350,6 @@ label.status = Status label.channels = Channels label.channel_title_item_count = {0} ({1}) label.blog_item_published_on_date = {0} {1} -label.select_das_service_from_table = Select a DAS service from the table to read a full description here. label.session_update = Session Update label.new_vamsas_session = New Vamsas Session action.load_vamsas_session = Load Vamsas Session... @@ -367,7 +365,8 @@ label.optimise_order = Optimise Order label.seq_sort_by_score = Sequence sort by Score label.load_colours = Load Colours label.save_colours = Save Colours -label.fetch_das_features = Fetch DAS Features +label.load_colours_tooltip = Load feature colours and filters from file +label.save_colours_tooltip = Save feature colours and filters to file label.selected_database_to_fetch_from = Selected {0} database {1} to fetch from {2} label.database_param = Database: {0} label.example = Example @@ -399,24 +398,17 @@ label.view_name_original = Original label.enter_view_name = Enter View Name label.enter_label = Enter label label.enter_label_for_the_structure = Enter a label for the structure -label.pdb_entry_is_already_displayed = {0} is already displayed.\nDo you want to re-use this viewer ? -label.map_sequences_to_visible_window = Map Sequences to Visible Window: {0} -label.add_pdbentry_to_view = Do you want to add {0} to the view called\n{1}\n -label.align_to_existing_structure_view = Align to existing structure view label.pdb_entries_couldnt_be_retrieved = The following pdb entries could not be retrieved from the PDB\:\n{0}\nPlease retry, or try downloading them manually. label.couldnt_load_file = Couldn't load file label.couldnt_find_pdb_id_in_file = Couldn't find a PDB id in the file supplied. Please enter an Id to identify this structure. label.no_pdb_id_in_file = No PDB Id in File label.couldnt_read_pasted_text = Couldn't read the pasted text {0} label.error_parsing_text = Error parsing text -label.enter_local_das_source = Enter Nickname & URL of Local DAS Source -label.you_can_only_edit_or_remove_local_das_sources = You can only edit or remove local DAS Sources! -label.public_das_source = Public DAS source - not editable label.input_alignment_from_url = Input Alignment From URL label.input_alignment = Input Alignment label.couldnt_import_as_vamsas_session = Couldn't import {0} as a new vamsas session. label.vamsas_document_import_failed = Vamsas Document Import Failed -label.couldnt_locate = Couldn't locate {0} +label.couldnt_locate = Could not locate {0} label.url_not_found = URL not found label.new_sequence_url_link = New sequence URL link label.cannot_edit_annotations_in_wrapped_view = Cannot edit annotations in wrapped view @@ -428,8 +420,6 @@ label.invalid_url = Invalid URL ! label.error_loading_file = Error loading file label.problems_opening_file = Encountered problems opening {0}!! label.file_open_error = File open error -label.no_das_sources_selected_warn = No das sources were selected.\nPlease select some sources and\ntry again. -label.no_das_sources_selected_title = No DAS Sources Selected label.colour_scheme_exists_overwrite = Colour scheme {0} exists.\nContinue saving colour scheme as {1}?" label.duplicate_scheme_name = Duplicate scheme name label.jalview_new_questionnaire = There is a new Questionnaire available. Would you like to complete it now ?\n @@ -502,6 +492,10 @@ label.edit_name_description = Edit Name/Description... label.create_sequence_feature = Create Sequence Feature... label.edit_sequence = Edit Sequence label.edit_sequences = Edit Sequences +label.insert_gap = Insert 1 gap +label.insert_gaps = Insert {0} gaps +label.delete_gap = Delete 1 gap +label.delete_gaps = Delete {0} gaps label.sequence_details = Sequence Details label.jmol_help = Jmol Help label.chimera_help = Chimera Help @@ -531,7 +525,6 @@ label.threshold_feature_above_threshold = Above Threshold label.threshold_feature_below_threshold = Below Threshold label.adjust_threshold = Adjust threshold label.toggle_absolute_relative_display_threshold = Toggle between absolute and relative display threshold. -label.colour_by_label_tip = Display features of the same type with a different label using a different colour. (e.g. domain features) label.select_colour_minimum_value = Select Colour for Minimum Value label.select_colour_maximum_value = Select Colour for Maximum Value label.open_url_param = Open URL {0} @@ -623,7 +616,6 @@ label.visual = Visual label.connections = Connections label.output = Output label.editing = Editing -label.das_settings = DAS Settings label.web_services = Web Services label.right_click_to_edit_currently_selected_parameter = Right click to edit currently selected parameter. label.let_jmol_manage_structure_colours = Let Jmol manage structure colours @@ -639,10 +631,6 @@ label.delete_service_url = Delete Service URL label.details = Details label.options = Options label.parameters = Parameters -label.available_das_sources = Available DAS Sources -label.full_details = Full Details -label.authority = Authority -label.type = Type label.proxy_server = Proxy Server label.file_output = File Output label.select_input_type = Select input type @@ -676,7 +664,8 @@ label.2d_rna_structure_line = 2D RNA {0} (alignment) label.2d_rna_sequence_name = 2D RNA - {0} label.edit_name_and_description_current_group = Edit name and description of current group label.from_file = From File -label.enter_pdb_id = Enter PDB Id (or pdbid:chaincode) +label.enter_pdb_id = Enter PDB Id +label.enter_pdb_id_tip = Enter PDB Id (or pdbid:chaincode) label.text_colour = Text Colour... label.structure = Structure label.show_pdbstruct_dialog = 3D Structure Data... @@ -710,9 +699,6 @@ label.sort_alignment_new_tree = Sort Alignment With New Tree label.add_sequences = Add Sequences label.new_window = New Window label.split_window = Split Window -label.refresh_available_sources = Refresh Available Sources -label.use_registry = Use Registry -label.add_local_source = Add Local Source label.set_as_default = Set as Default label.show_labels = Show labels action.background_colour = Background Colour... @@ -771,7 +757,7 @@ label.run_with_preset_params = Run {0} with preset label.view_and_change_parameters_before_running_calculation = View and change parameters before running calculation label.view_documentation = View documentation label.select_return_type = Select return type -label.translation_of_params = Translation of {0} +label.translation_of_params = Translation of {0} (Table {1}) label.features_for_params = Features for - {0} label.annotations_for_params = Annotations for - {0} label.generating_features_for_params = Generating features for - {0} @@ -782,7 +768,7 @@ label.pairwise_aligned_sequences = Pairwise Aligned Sequences label.original_data_for_params = Original Data for {0} label.points_for_params = Points for {0} label.transformed_points_for_params = Transformed points for {0} -label.graduated_color_for_params = Graduated Feature Colour for {0} +label.variable_color_for = Variable Feature Colour for {0} label.select_background_colour = Select Background Colour label.invalid_font = Invalid Font label.separate_multiple_accession_ids = Enter one or more accession IDs separated by a semi-colon ";" @@ -853,7 +839,6 @@ label.multiharmony = Multi-Harmony label.unable_start_web_service_analysis = Unable to start web service analysis label.job_couldnt_be_started_check_input = The Job couldn't be started. Please check your input, and the Jalview console for any warning messages. label.prompt_each_time = Prompt each time -label.use_source = Use Source label.couldnt_save_project = Couldn't save project label.error_whilst_saving_current_state_to = Error whilst saving current state to {0} label.error_whilst_loading_project_from = Error whilst loading project from {0} @@ -869,7 +854,7 @@ label.msa_service_is_unknown = The Multiple Sequence Alignment Service named {0} label.service_called_is_not_seq_search_service = The Service called \n{0}\nis not a \nSequence Search Service\! label.seq_search_service_is_unknown = The Sequence Search Service named {0} is unknown label.feature_type = Feature Type -label.display = Display +label.show = Show label.service_url = Service URL label.copied_sequences = Copied sequences label.cut_sequences = Cut Sequences @@ -879,7 +864,6 @@ label.error_unsupported_owwner_user_colour_scheme = Unsupported owner for User C label.save_alignment_to_file = Save Alignment to file label.save_features_to_file = Save Features to File label.save_annotation_to_file = Save Annotation to File -label.no_features_on_alignment = No features found on alignment label.save_pdb_file = Save PDB File label.save_text_to_file = Save Text to File label.save_state = Save State @@ -1079,8 +1063,6 @@ exception.unable_to_create_internet_config = Unable to create an Internet Config exception.invocation_target_calling_url = InvocationTargetException while calling openURL: {0} exception.illegal_access_calling_url = IllegalAccessException while calling openURL: {0} exception.interrupted_launching_browser = InterruptedException while launching browser: {0} -exception.das_source_doesnt_support_sequence_command = Source {0} does not support the sequence command. -exception.invalid_das_source = Invalid das source: {0} exception.ebiembl_retrieval_failed_on = EBI EMBL XML retrieval failed on {0}:{1} exception.no_pdb_records_for_chain = No PDB Records for {0} chain {1} exception.unexpected_handling_rnaml_translation_for_pdb = Unexpected exception when handling RNAML translation of PDB data @@ -1135,10 +1117,6 @@ status.parsing_results = Parsing results. status.processing = Processing... status.refreshing_web_service_menus = Refreshing Web Service Menus status.collecting_job_results = Collecting job results. -status.fetching_das_sequence_features = Fetching DAS Sequence Features -status.no_das_sources_active = No DAS Sources Active -status.das_feature_fetching_cancelled = DAS Feature Fetching Cancelled -status.das_feature_fetching_complete = DAS Feature Fetching Complete status.fetching_db_refs = Fetching db refs status.loading_cached_pdb_entries = Loading Cached PDB Entries status.searching_for_pdb_structures = Searching for PDB Structures @@ -1161,8 +1139,6 @@ warn.urls_not_contacted = URLs that could not be contacted warn.urls_no_jaba = URLs without any JABA Services info.validate_jabaws_server = Validate JabaWS Server ?\n(Look in console output for results) label.test_server = Test Server? -info.you_want_jalview_to_find_uniprot_accessions = Do you want Jalview to find\nUniprot Accession ids for given sequence names? -label.find_uniprot_accession_ids = Find Uniprot Accession Ids label.new_sequence_fetcher = New Sequence Fetcher label.additional_sequence_fetcher = Additional Sequence Fetcher label.select_database_retrieval_source = Select Database Retrieval Source @@ -1215,7 +1191,6 @@ label.pdb_sequence_fetcher = PDB Sequence Fetcher label.result = result label.results = results label.structure_chooser = Structure Chooser -label.select = Select : label.invert = Invert label.select_pdb_file = Select PDB File info.select_filter_option = Select Filter Option/Manual Entry @@ -1285,7 +1260,6 @@ label.SEQUENCE_ID_for_DB_ACCESSION1 = Please review your URL links in the 'Conne label.SEQUENCE_ID_for_DB_ACCESSION2 = URL links using '$SEQUENCE_ID$' for DB accessions now use '$DB_ACCESSION$'. label.do_not_display_again = Do not display this message again exception.url_cannot_have_duplicate_id = {0} cannot be used as a label for more than one line -label.filter = Filter text: action.customfilter = Custom only action.showall = Show All label.insert = Insert: @@ -1300,7 +1274,6 @@ label.edit_sequence_url_link = Edit sequence URL link warn.name_cannot_be_duplicate = User-defined URL names must be unique and cannot be MIRIAM ids label.output_seq_details = Output Sequence Details to list all database references label.urllinks = Links -label.default_cache_size = Default Cache Size action.clear_cached_items = Clear Cached Items label.togglehidden = Show hidden regions label.quality_descr = Alignment Quality based on Blosum62 scores @@ -1327,6 +1300,8 @@ label.matchCondition_contains = Contains label.matchCondition_notcontains = Does not contain label.matchCondition_matches = Matches label.matchCondition_notmatches = Does not match +label.matchCondition_present = Is present +label.matchCondition_notpresent = Is not present label.matchCondition_eq = = label.matchCondition_ne = not = label.matchCondition_lt = < @@ -1334,18 +1309,87 @@ label.matchCondition_le = <= label.matchCondition_gt = > label.matchCondition_ge = >= label.numeric_required = The value should be numeric -label.no_attributes = No attributes known -label.no_numeric_attributes = No numeric attributes known +label.filter = Filter label.filters = Filters -label.match_condition = Match condition label.join_conditions = Join conditions with -label.feature_to_filter = Feature to filter -label.colour_by_value = Colour by value -label.colour_by_text = Colour by text label.score = Score -label.attribute = Attribute label.colour_by_label = Colour by label -label.variable_colour = Variable colour -label.no_colour = No colour: -label.select_no_value_colour = Select colour when no value -label.select_new_colour = Select new colour +label.variable_colour = Variable colour... +label.select_colour = Select colour +option.enable_disable_autosearch = When ticked, search is performed automatically +option.autosearch = Autosearch +label.retrieve_ids = Retrieve IDs +label.display_settings_for = Display settings for {0} features +label.simple = Simple +label.simple_colour = Simple Colour +label.colour_by_text = Colour by text +label.graduated_colour = Graduated Colour +label.by_text_of = By text of +label.by_range_of = By range of +label.or = Or +label.and = And +label.sequence_feature_colours = Sequence Feature Colours +label.best_quality = Best Quality +label.best_resolution = Best Resolution +label.most_protein_chain = Most Protein Chain +label.most_bound_molecules = Most Bound Molecules +label.most_polymer_residues = Most Polymer Residues +label.cached_structures = Cached Structures +label.free_text_search = Free Text Search +label.backupfiles_confirm_delete = Confirm delete +label.backupfiles_confirm_delete_old_files = Delete the following older backup files? (see the Backups tab in Preferences for more options) +label.backupfiles_confirm_save_file = Confirm save file +label.backupfiles_confirm_save_file_backupfiles_roll_wrong = Something possibly went wrong with the backups of this file. +label.backupfiles_confirm_save_new_saved_file_ok = The new saved file seems okay. +label.backupfiles_confirm_save_new_saved_file_not_ok = The new saved file might not be okay. +label.backups = Backups +label.backup = Backup +label.backup_files = Backup Files +label.enable_backupfiles = Enable backup files +label.backup_filename_strategy = Backup filename strategy +label.append_to_filename = Append to filename (%n is replaced by the backup number) +label.append_to_filename_tooltip = %n in the text will be replaced by the backup number. The text will appear after the filename. See the summary box above. +label.index_digits = Number of digits to use for the backup number (%n) +label.summary_of_backups_scheme = Summary of backup scheme +label.increment_index = Increase appended text numbers - newest file has largest number. +label.reverse_roll = "Roll" appended text numbers - newest backup file is always number 1. +label.keep_files = Deleting old backup files +label.keep_all_backup_files = Do not delete old backup files +label.keep_only_this_number_of_backup_files = Keep only this number of most recent backup files +label.autodelete_old_backup_files = Autodelete old backup files: +label.always_ask = Always ask +label.auto_delete = Automatically delete +label.filename = filename +label.braced_oldest = (oldest) +label.braced_newest = (most recent) +label.configuration = Configuration +label.configure_feature_tooltip = Click to configure variable colour or filters +label.schemes = Schemes +label.customise = Customise +label.default = Default +label.single_file = Single backup +label.keep_all_versions = Keep all versions +label.rolled_backups = Rolled backup files +label.previously_saved_scheme = Previously saved scheme +label.no_backup_files = NO BACKUP FILES +label.include_backup_files = Include backup files +label.cancel_changes = Cancel changes +label.warning_confirm_change_reverse = Warning!\nIf you change the increment/decrement of the backup filename number, without changing the suffix or number of digits,\nthis may cause loss of backup files created with the previous backup filename scheme.\nAre you sure you wish to do this? +label.change_increment_decrement = Change increment/decrement? +label.was_previous = was {0} +label.newerdelete_replacement_line = Backup file\n''{0}''\t(modified {2}, size {4})\nis to be deleted and replaced by apparently older file\n''{1}''\t(modified {3}, size {5}). +label.confirm_deletion_or_rename = Confirm deletion of ''{0}'' or rename to ''{1}''? +label.newerdelete_line = Backup file\n''{0}''\t(modified {2}, size {4})\nis to be deleted but is newer than the oldest remaining backup file\n''{1}''\t(modified {3}, size {5}). +label.confirm_deletion = Confirm deletion of ''{0}''? +label.delete = Delete +label.rename = Rename +label.keep = Keep +label.file_info = (modified {0}, size {1}) +label.annotation_name = Annotation Name +label.annotation_description = Annotation Description +label.edit_annotation_name_description = Edit Annotation Name/Description +label.alignment = alignment +label.pca = PCA +label.create_image_of = Create {0} image of {1} +label.click_to_edit = Click to edit, right-click for menu +label.by_annotation_tooltip = Annotation Colour is configured from the main Colour menu