X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=resources%2Flang%2FMessages.properties;h=f526699882a74bb686c625dac6f0066c25a817a3;hb=6c118f968f6e8f726fdbb6ce6c24d870b22419bb;hp=e63752d376a8ee9a80ddaf9ef157e91437dba693;hpb=0288494d034d48dd8ce0c5a8654ac2ee695b4573;p=jalview.git

diff --git a/resources/lang/Messages.properties b/resources/lang/Messages.properties
index e63752d..f526699 100644
--- a/resources/lang/Messages.properties
+++ b/resources/lang/Messages.properties
@@ -381,10 +381,8 @@ label.remove_from_default_list = Remove from default list?
 label.remove_user_defined_colour = Remove user defined colour
 label.you_must_select_least_two_sequences = You must select at least 2 sequences.
 label.invalid_selection = Invalid Selection
-label.principal_component_analysis_must_take_least_four_input_sequences = Principal component analysis must take\nat least 4 input sequences.
 label.sequence_selection_insufficient = Sequence selection insufficient
-label.you_need_more_two_sequences_selected_build_tree = You need to have more than two sequences selected to build a tree!
-label.you_need_more_than_n_sequences = You need to have more than {0} sequences
+label.you_need_at_least_n_sequences = You need to select at least {0} sequences
 label.not_enough_sequences = Not enough sequences
 label.selected_region_to_tree_may_only_contain_residues_or_gaps =  The selected region to create a tree may\nonly contain residues or gaps.\nTry using the Pad function in the edit menu,\nor one of the multiple sequence alignment web services.
 label.sequences_selection_not_aligned = Sequences in selection are not aligned
@@ -675,7 +673,8 @@ label.2d_rna_structure_line = 2D RNA {0} (alignment)
 label.2d_rna_sequence_name = 2D RNA - {0}
 label.edit_name_and_description_current_group = Edit name and description of current group
 label.from_file = From File
-label.enter_pdb_id = Enter PDB Id (or pdbid:chaincode)
+label.enter_pdb_id = Enter PDB Id
+label.enter_pdb_id_tip = Enter PDB Id (or pdbid:chaincode)
 label.text_colour = Text Colour...
 label.structure = Structure
 label.show_pdbstruct_dialog = 3D Structure Data...
@@ -747,7 +746,6 @@ label.delete_sbrs_definition = Delete SBRS Definition
 label.your_sequences_have_been_verified = Your sequences have been verified against known sequence databases.\n(Use Calculate | Show flanking regions to show enclosing sequence.)\nTo preserve data changes, save your alignment.\n\n
 label.sequences_updated = Sequences updated
 label.dbref_search_completed = DBRef search completed
-label.show_all_chains = Show all chains
 label.fetch_all_param = Fetch all {0}
 label.paste_new_window = Paste To New Window
 label.settings_for_param = Settings for {0}
@@ -916,7 +914,6 @@ label.as_percentage = As Percentage
 error.not_implemented = Not implemented
 error.no_such_method_as_clone1_for = No such method as clone1 for {0}
 error.null_from_clone1 = Null from clone1!
-error.implementation_error_sortbyfeature = Implementation Error - sortByFeature method must be one of FEATURE_SCORE, FEATURE_LABEL or FEATURE_DENSITY.
 error.not_yet_implemented = Not yet implemented
 error.unknown_type_dna_or_pep = Unknown Type {0} - dna or pep are the only allowed values.
 error.implementation_error_dont_know_threshold_annotationcolourgradient = Implementation error: don't know about threshold setting for current AnnotationColourGradient.
@@ -1227,6 +1224,7 @@ label.configure_displayed_columns = Customise Displayed Options
 label.start_jalview = Start Jalview
 label.biojs_html_export = BioJS
 label.scale_as_cdna = Scale protein residues to codons
+label.font_as_cdna = Use same font for cDNA and peptide
 label.scale_protein_to_cdna = Scale Protein to cDNA
 label.scale_protein_to_cdna_tip = Make protein residues same width as codons in split frame views
 info.select_annotation_row = Select Annotation Row
@@ -1284,7 +1282,6 @@ label.SEQUENCE_ID_no_longer_used = $SEQUENCE_ID$ is no longer used for DB access
 label.SEQUENCE_ID_for_DB_ACCESSION1 = Please review your URL links in the 'Connections' tab of the Preferences window:
 label.SEQUENCE_ID_for_DB_ACCESSION2 = URL links using '$SEQUENCE_ID$' for DB accessions now use '$DB_ACCESSION$'.
 label.do_not_display_again = Do not display this message again
-exception.url_cannot_have_miriam_id = {0} is a MIRIAM id and cannot be used as a custom url name
 exception.url_cannot_have_duplicate_id = {0} cannot be used as a label for more than one line
 label.filter = Filter text:
 action.customfilter = Custom only
@@ -1299,12 +1296,37 @@ label.database = Database
 label.urltooltip = Only one url, which must use a sequence id, can be selected for the 'On Click' option
 label.edit_sequence_url_link = Edit sequence URL link
 warn.name_cannot_be_duplicate = User-defined URL names must be unique and cannot be MIRIAM ids
-label.invalid_name = Invalid Name !
 label.output_seq_details = Output Sequence Details to list all database references
 label.urllinks = Links
+label.default_cache_size = Default Cache Size
+action.clear_cached_items = Clear Cached Items
+label.togglehidden = Show hidden regions
 label.quality_descr = Alignment Quality based on Blosum62 scores
 label.conservation_descr = Conservation of total alignment less than {0}% gaps
 label.consensus_descr = PID
 label.complement_consensus_descr = PID for cDNA
 label.strucconsensus_descr = PID for base pairs
-label.occupancy_descr = Number of aligned positions 
\ No newline at end of file
+label.occupancy_descr = Number of aligned positions 
+label.show_experimental = Enable experimental features
+label.show_experimental_tip = Enable any new and currently 'experimental' features (see Latest Release Notes for details)
+label.warning_hidden = Warning: {0} {1} is currently hidden
+label.overview_settings = Overview settings
+label.ov_legacy_gap = Use legacy gap colouring (gaps are white)
+label.gap_colour = Gap colour:
+label.ov_show_hide_default = Show hidden regions when opening overview
+label.hidden_colour = Hidden colour:
+label.select_gap_colour = Select gap colour
+label.select_hidden_colour = Select hidden colour
+label.overview = Overview
+label.reset_to_defaults = Reset to defaults
+label.oview_calc = Recalculating overview...
+option.enable_disable_autosearch = When ticked, search is performed automatically
+option.autosearch = Autosearch
+label.retrieve_ids = Retrieve IDs
+label.best_quality = Best Quality
+label.best_resolution = Best Resolution
+label.most_protein_chain = Most Protein Chain
+label.most_bound_molecules = Most Bound Molecules
+label.most_polymer_residues = Most Polymer Residues
+label.cached_structures = Cached Structures
+label.free_text_search = Free Text Search