X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fanalysis%2FCodingUtils.java;fp=src%2Fjalview%2Fanalysis%2FCodingUtils.java;h=92b39c38d55a27dfc8510ec6ad23319fc0f87615;hb=ec8f3cedf60fb1feed6d34de6b49f6bfa78b9dd8;hp=34f861981dc4643fc585881bb68f1130776d17d5;hpb=056dad85a910551cc95e44d451a61f6b8c4dd35d;p=jalview.git diff --git a/src/jalview/analysis/CodingUtils.java b/src/jalview/analysis/CodingUtils.java index 34f8619..92b39c3 100644 --- a/src/jalview/analysis/CodingUtils.java +++ b/src/jalview/analysis/CodingUtils.java @@ -109,6 +109,15 @@ public class CodingUtils return result; } + public static void decodeCodon2(int encoded, char[] result) + { + result[2] = decodeNucleotide(encoded & 3); + encoded = encoded >>> CODON_ENCODING_BITSHIFT; + result[1] = decodeNucleotide(encoded & 3); + encoded = encoded >>> CODON_ENCODING_BITSHIFT; + result[0] = decodeNucleotide(encoded & 3); + } + /** * Convert value 0/1/2/3 to 'A'/'C'/'G'/'T' *