X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fanalysis%2FDna.java;fp=src%2Fjalview%2Fanalysis%2FDna.java;h=5696838739ac6044e11ef26fdceaedae83542fa2;hb=4099019578bbeb81b76154922851ada38fb0017d;hp=1d5f996b44279f5339d86474ac3f19bf364be00c;hpb=6672a610d326db688de4adf1e6def0fdb165185b;p=jalview.git diff --git a/src/jalview/analysis/Dna.java b/src/jalview/analysis/Dna.java index 1d5f996..5696838 100644 --- a/src/jalview/analysis/Dna.java +++ b/src/jalview/analysis/Dna.java @@ -20,12 +20,6 @@ */ package jalview.analysis; -import java.util.ArrayList; -import java.util.Arrays; -import java.util.Comparator; -import java.util.List; -import java.util.Map; - import jalview.api.AlignViewportI; import jalview.datamodel.AlignedCodon; import jalview.datamodel.AlignedCodonFrame; @@ -47,9 +41,15 @@ import jalview.util.DBRefUtils; import jalview.util.MapList; import jalview.util.ShiftList; +import java.util.ArrayList; +import java.util.Arrays; +import java.util.Comparator; +import java.util.List; +import java.util.Map; + public class Dna { - private static final String STOP_X = "X"; + private static final String STOP_ASTERIX = "*"; private static final Comparator comparator = new CodonComparator(); @@ -544,7 +544,7 @@ public class Dna } if (aa.equals("STOP")) { - aa = STOP_X; + aa = STOP_ASTERIX; } resSize++; }