X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fanalysis%2FFinder.java;fp=src%2Fjalview%2Fanalysis%2FFinder.java;h=191f6e832ae0dd24176b8705d6c65dd09cec9283;hb=be762d8d9c71a7aa3121e845c45911c7192b7827;hp=25ee7d2bce345e3722b0c3e3f988687724db3b50;hpb=d1bb7a31fc091606aedbc255a5766ac79e36fa91;p=jalview.git diff --git a/src/jalview/analysis/Finder.java b/src/jalview/analysis/Finder.java index 25ee7d2..191f6e8 100644 --- a/src/jalview/analysis/Finder.java +++ b/src/jalview/analysis/Finder.java @@ -207,9 +207,8 @@ public class Finder { resIndex = regex.matchedFrom(); - if ((selection != null && selection.getSize() > 0) - && (resIndex + spaces.get(resIndex) < selection - .getStartRes())) + if ((selection != null && selection.getSize() > 0) && (resIndex + + spaces.get(resIndex) < selection.getStartRes())) { continue; } @@ -218,9 +217,9 @@ public class Finder int eres = seq.findPosition(regex.matchedTo() - 1 + (spaces.get(regex.matchedTo() - 1))); // only add result if not contained in previous result - if (lastm == null - || (lastm.getSequence() != seq || (!(lastm.getStart() <= sres && lastm - .getEnd() >= eres)))) + if (lastm == null || (lastm.getSequence() != seq + || (!(lastm.getStart() <= sres + && lastm.getEnd() >= eres)))) { lastm = searchResults.addResult(seq, sres, eres); }