X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fanalysis%2FParseProperties.java;fp=src%2Fjalview%2Fanalysis%2FParseProperties.java;h=9937a4729e4ad7d93de8f40748561e59ab879e8c;hb=a83adb45bdf9554e270921b4baad94defd314b36;hp=4b68d93a666340d0fd6539fc3f1f2f0bcae26464;hpb=d4ec118f86b5c9dee801e743c46aaacc7bb521d1;p=jalview.git

diff --git a/src/jalview/analysis/ParseProperties.java b/src/jalview/analysis/ParseProperties.java
index 4b68d93..9937a47 100644
--- a/src/jalview/analysis/ParseProperties.java
+++ b/src/jalview/analysis/ParseProperties.java
@@ -23,6 +23,7 @@ package jalview.analysis;
 import jalview.datamodel.AlignmentAnnotation;
 import jalview.datamodel.AlignmentI;
 import jalview.datamodel.SequenceI;
+import jalview.util.Platform;
 
 import com.stevesoft.pat.Regex;
 
@@ -90,7 +91,7 @@ public class ParseProperties
           String[] ScoreDescriptions, String regex, boolean repeat)
   {
     int count = 0;
-    Regex pattern = new Regex(regex);
+    Regex pattern = Platform.newRegex(regex, null);
     if (pattern.numSubs() > ScoreNames.length)
     {
       // Check that we have enough labels and descriptions for any parsed
@@ -134,7 +135,7 @@ public class ParseProperties
           double score = Double.NaN;
           try
           {
-            score = Double.valueOf(sstring).doubleValue();
+            score = new Double(sstring).doubleValue();
           } catch (Exception e)
           {
             // don't try very hard to parse if regex was wrong.