X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fanalysis%2FRna.java;fp=src%2Fjalview%2Fanalysis%2FRna.java;h=227bf09f76d088b799b7704c44d051565e32655b;hb=b8810711642d8473325c8a3d3e76cc5c3c9b5bbd;hp=e4a0d766dd4305c5cc610939e59fb601b8e110ee;hpb=936d4dc095734df2b1e9f3bf9e0bd29b9c86434c;p=jalview.git

diff --git a/src/jalview/analysis/Rna.java b/src/jalview/analysis/Rna.java
index e4a0d76..227bf09 100644
--- a/src/jalview/analysis/Rna.java
+++ b/src/jalview/analysis/Rna.java
@@ -26,6 +26,10 @@
 
 package jalview.analysis;
 
+import jalview.analysis.SecStrConsensus.SimpleBP;
+import jalview.datamodel.SequenceFeature;
+import jalview.util.MessageManager;
+
 import java.util.ArrayList;
 import java.util.Arrays;
 import java.util.HashSet;
@@ -33,10 +37,6 @@ import java.util.Hashtable;
 import java.util.Stack;
 import java.util.Vector;
 
-import jalview.analysis.SecStrConsensus.SimpleBP;
-import jalview.datamodel.SequenceFeature;
-import jalview.util.MessageManager;
-
 public class Rna
 {
 
@@ -65,7 +65,7 @@ public class Rna
     {
       for (int i = 0; i < openingPars.length; i++)
       {
-        System.out.println(closingPars[i] + "->" + openingPars[i]);
+        // System.out.println(closingPars[i] + "->" + openingPars[i]);
         put(closingPars[i], openingPars[i]);
       }
     }
@@ -107,7 +107,6 @@ public class Rna
   public static Vector<SimpleBP> GetSimpleBPs(CharSequence line)
           throws WUSSParseException
   {
-    System.out.println(line);
     Hashtable<Character, Stack<Integer>> stacks = new Hashtable<Character, Stack<Integer>>();
     Vector<SimpleBP> pairs = new Vector<SimpleBP>();
     int i = 0;