X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fappletgui%2FAPopupMenu.java;h=d625f785d7d0237d3b5690ec37b4ac0b2c6fbb41;hb=e80a27f6eb12a788bbc78347a760e795ad8bd8c6;hp=6f83cec8935b78c4e6c9114a3433ce5f7a995fb7;hpb=cd06f45d5fedf6fcc87c0d77aa6c2b1fb6ea7a46;p=jalview.git

diff --git a/src/jalview/appletgui/APopupMenu.java b/src/jalview/appletgui/APopupMenu.java
index 6f83cec..d625f78 100644
--- a/src/jalview/appletgui/APopupMenu.java
+++ b/src/jalview/appletgui/APopupMenu.java
@@ -1150,11 +1150,10 @@ public class APopupMenu extends java.awt.PopupMenu implements
 
     if (conservationMenuItem.getState())
     {
-
-      sg.cs.setConservation(Conservation.calculateConservation("Group", 3,
-              sg.getSequences(ap.av.getHiddenRepSequences()), 0, ap.av
-                      .getAlignment().getWidth(), false, ap.av
-                      .getConsPercGaps(), false));
+      sg.cs.setConservation(Conservation.calculateConservation("Group", sg
+              .getSequences(ap.av.getHiddenRepSequences()), 0, ap.av
+              .getAlignment().getWidth(), false, ap.av.getConsPercGaps(),
+              false));
       SliderPanel.setConservationSlider(ap, sg.cs, sg.getName());
       SliderPanel.showConservationSlider();
     }