X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fappletgui%2FAlignFrame.java;fp=src%2Fjalview%2Fappletgui%2FAlignFrame.java;h=85fb03c112dfc72bc1baf02a3abdcb8c654b0181;hb=09d3b755d9b00f5c3acb44049aedd49361dc0690;hp=5ad212e8b6ffe11d437ed247cdf31e0495eb71e2;hpb=d34f80c67881e79d7304eb143e9c907bc16d052b;p=jalview.git

diff --git a/src/jalview/appletgui/AlignFrame.java b/src/jalview/appletgui/AlignFrame.java
index 5ad212e..85fb03c 100644
--- a/src/jalview/appletgui/AlignFrame.java
+++ b/src/jalview/appletgui/AlignFrame.java
@@ -1447,14 +1447,12 @@ public class AlignFrame extends EmbmenuFrame implements ActionListener,
     {
       features = formatter.printJalviewFormat(
               viewport.getAlignment().getSequencesArray(),
-              getDisplayedFeatureCols(), null, getDisplayedFeatureGroups(),
-              true);
+              alignPanel.getFeatureRenderer(), true);
     }
     else
     {
       features = formatter.printGffFormat(viewport.getAlignment()
-              .getSequencesArray(), getDisplayedFeatureCols(),
-              getDisplayedFeatureGroups(), true);
+              .getSequencesArray(), alignPanel.getFeatureRenderer(), true);
     }
 
     if (displayTextbox)