X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fappletgui%2FAlignViewport.java;fp=src%2Fjalview%2Fappletgui%2FAlignViewport.java;h=262948df652a030f5cf27de93e38264e6d27cc12;hb=4687e1243f51bd09334792b8a7ce518a5aa07de7;hp=b07666e7bc153f7cb51bc54cd46fa483a994da78;hpb=7e441a4a9594821ec56539b29cb3b8a13bfa3c65;p=jalview.git

diff --git a/src/jalview/appletgui/AlignViewport.java b/src/jalview/appletgui/AlignViewport.java
index b07666e..262948d 100644
--- a/src/jalview/appletgui/AlignViewport.java
+++ b/src/jalview/appletgui/AlignViewport.java
@@ -20,7 +20,6 @@
  */
 package jalview.appletgui;
 
-import jalview.analysis.TreeModel;
 import jalview.api.AlignViewportI;
 import jalview.api.FeatureSettingsModelI;
 import jalview.bin.JalviewLite;
@@ -54,23 +53,12 @@ public class AlignViewport extends AlignmentViewport
 
   boolean validCharWidth = true;
 
-  TreeModel currentTree = null;
-
   public jalview.bin.JalviewLite applet;
 
   boolean MAC = false;
 
   private AnnotationColumnChooser annotationColumnSelectionState;
 
-  @Override
-  public void finalize()
-  {
-    applet = null;
-    quality = null;
-    alignment = null;
-    colSel = null;
-  }
-
   public AlignViewport(AlignmentI al, JalviewLite applet)
   {
     super(al);
@@ -274,16 +262,6 @@ public class AlignViewport extends AlignmentViewport
     ranges.setEndSeq(height / getCharHeight());
   }
 
-  public void setCurrentTree(TreeModel tree)
-  {
-    currentTree = tree;
-  }
-
-  public TreeModel getCurrentTree()
-  {
-    return currentTree;
-  }
-
   boolean centreColumnLabels;
 
   public boolean getCentreColumnLabels()