X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fappletgui%2FOverviewPanel.java;fp=src%2Fjalview%2Fappletgui%2FOverviewPanel.java;h=8ce597d06db20b454b89a05aa93f4e62cff0166b;hb=4687e1243f51bd09334792b8a7ce518a5aa07de7;hp=e74e1cd5f7e1985a1e5fa4884a198056208ced06;hpb=7e441a4a9594821ec56539b29cb3b8a13bfa3c65;p=jalview.git

diff --git a/src/jalview/appletgui/OverviewPanel.java b/src/jalview/appletgui/OverviewPanel.java
index e74e1cd..8ce597d 100755
--- a/src/jalview/appletgui/OverviewPanel.java
+++ b/src/jalview/appletgui/OverviewPanel.java
@@ -31,6 +31,7 @@ import java.awt.BorderLayout;
 import java.awt.CheckboxMenuItem;
 import java.awt.Cursor;
 import java.awt.Dimension;
+import java.awt.Frame;
 import java.awt.Panel;
 import java.awt.PopupMenu;
 import java.awt.event.ComponentAdapter;
@@ -200,7 +201,7 @@ public class OverviewPanel extends Panel implements Runnable,
                 av.getAlignment().getHiddenSequences(),
                 av.getAlignment().getHiddenColumns());
       }
-      ap.paintAlignment(false);
+      ap.paintAlignment(false, false);
     }
   }
 
@@ -322,6 +323,9 @@ public class OverviewPanel extends Panel implements Runnable,
     try
     {
       av.getRanges().removePropertyChangeListener(this);
+      Frame parent = (Frame) getParent();
+      parent.dispose();
+      parent.setVisible(false);
     } finally
     {
       av = null;