X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fbin%2FCommands.java;h=7f493e0ff15fe9e21b683c4cdbc6942da9b4e2c4;hb=dae873d07c9cba8be54c6c48b3da5e6116552a15;hp=bcf231e89c36436435a277914873078c4d455273;hpb=91b3af9bfa70fc853ec6e74096454e17882a7543;p=jalview.git

diff --git a/src/jalview/bin/Commands.java b/src/jalview/bin/Commands.java
index bcf231e..7f493e0 100644
--- a/src/jalview/bin/Commands.java
+++ b/src/jalview/bin/Commands.java
@@ -569,9 +569,20 @@ public class Commands
                           structureFilepath, tft, paeFilepath, false,
                           ssFromStructure, false, viewerType);
 
-          if (headless)
+          if (sv==null)
+          {
+            Console.error("Failed to import and open structure view.");
+            continue;
+          }
+          while (sv.isBusy())
           {
-            sv.setAsync(false);
+            try {
+              Thread.sleep(25);
+            }
+            catch (Exception x)
+            {
+              
+            }
           }
 
           String structureImageFilename = ArgParser.getValueFromSubValOrArg(