X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fbin%2Fargparser%2FArgParser.java;h=fe73053b33a219a8f8d191eaf3c1d3d940af2f35;hb=ce6d1e09276f8481e6975d0c28c60620dfb83883;hp=155f69e1af586ed3b54991cea80c95fb11a7714d;hpb=d335e9093099a7ffa812b61e734ddd88769ea9dd;p=jalview.git

diff --git a/src/jalview/bin/argparser/ArgParser.java b/src/jalview/bin/argparser/ArgParser.java
index 155f69e..fe73053 100644
--- a/src/jalview/bin/argparser/ArgParser.java
+++ b/src/jalview/bin/argparser/ArgParser.java
@@ -661,7 +661,7 @@ public class ArgParser
 
         // set allstructures to all non-primary structure options in this linked
         // id if --allstructures has been set
-        if (allStructures && (a.getType() == Type.STRUCTURE
+        if (allStructures && (a.hasType(Type.STRUCTURE)
         // || a.getType() == Type.STRUCTUREIMAGE)
         ) && !a.hasOption(Opt.PRIMARY))
         {