X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FAlignedCodonFrame.java;fp=src%2Fjalview%2Fdatamodel%2FAlignedCodonFrame.java;h=aca523eaf7a3b51ad4885729f819fa7f8b7a33bf;hb=708cc06af06aa2912319ad736bcfecb62081de39;hp=6103df505c90dfff69a16725189e309e8fb47add;hpb=e28dd7ed1ec94a76f68ad610fc3ddc0e5fa1f36c;p=jalview.git diff --git a/src/jalview/datamodel/AlignedCodonFrame.java b/src/jalview/datamodel/AlignedCodonFrame.java index 6103df5..aca523e 100644 --- a/src/jalview/datamodel/AlignedCodonFrame.java +++ b/src/jalview/datamodel/AlignedCodonFrame.java @@ -20,13 +20,13 @@ */ package jalview.datamodel; -import jalview.util.MapList; -import jalview.util.MappingUtils; - import java.util.AbstractList; import java.util.ArrayList; import java.util.List; +import jalview.util.MapList; +import jalview.util.MappingUtils; + /** * Stores mapping between the columns of a protein alignment and a DNA alignment * and a list of individual codon to amino acid mappings between sequences. @@ -134,7 +134,7 @@ public class AlignedCodonFrame } /* - * check that each mapped range lieS with the sequence range + * check that each mapped range lies within the sequence range * (necessary for circular CDS - example EMBL:J03321:AAA91567) * and mapped length covers (at least) sequence length */