X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FAlignment.java;fp=src%2Fjalview%2Fdatamodel%2FAlignment.java;h=19819a62a3895252ac758cb7b1f26175f941d17d;hb=349e8113d8686347b698a03ee5e40c9462be6eef;hp=4558d8d061ca68302c68d39938f57ccf5386808d;hpb=c4f4962eb930740b364e1404184850c9febca6f4;p=jalview.git

diff --git a/src/jalview/datamodel/Alignment.java b/src/jalview/datamodel/Alignment.java
index 4558d8d..19819a6 100755
--- a/src/jalview/datamodel/Alignment.java
+++ b/src/jalview/datamodel/Alignment.java
@@ -376,14 +376,14 @@ public class Alignment implements AlignmentI
       for (int i = 0; i < gSize; i++)
       {
         SequenceGroup sg = groups.get(i);
-        if (sg == null || sg.getSequences(null) == null)
+        if (sg == null || sg.getSequences() == null)
         {
           this.deleteGroup(sg);
           gSize--;
           continue;
         }
 
-        if (sg.getSequences(null).contains(s))
+        if (sg.getSequences().contains(s))
         {
           temp.add(sg);
         }