X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FDBRefEntry.java;fp=src%2Fjalview%2Fdatamodel%2FDBRefEntry.java;h=bc8d0cf1d1723e423b1d1d62608ce1a62d2bb6fa;hb=c6ff2e8a0e898035b248933704824484df4c4018;hp=98868ce64edbae6634dd50e80337b580a6ed6613;hpb=8910c0162b81b32ea0760daf7509a9a5f8ec1fea;p=jalview.git diff --git a/src/jalview/datamodel/DBRefEntry.java b/src/jalview/datamodel/DBRefEntry.java index 98868ce..bc8d0cf 100755 --- a/src/jalview/datamodel/DBRefEntry.java +++ b/src/jalview/datamodel/DBRefEntry.java @@ -27,15 +27,6 @@ import java.util.List; public class DBRefEntry implements DBRefEntryI { - /* - * the mapping to chromosome (genome) is held as an instance with - * source = speciesId - * version = assemblyId - * accessionId = "chromosome:" + chromosomeId - * map = mapping from sequence to reference assembly - */ - public static final String CHROMOSOME = "chromosome"; - String source = ""; String version = ""; @@ -344,14 +335,4 @@ public class DBRefEntry implements DBRefEntryI } return true; } - - /** - * Mappings to chromosome are held with accessionId as "chromosome:id" - * - * @return - */ - public boolean isChromosome() - { - return accessionId != null && accessionId.startsWith(CHROMOSOME + ":"); - } }