X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FFeatureProperties.java;h=e5ad74aec69645e784ce4612e472b61f32342b68;hb=a8f483d04205bb8273ee311c12968b7e86d205fa;hp=8c238ef0a5156f96f37980b72f4216e29a64d561;hpb=a45774ee31d9f35d4eff46d54d7deab719afb092;p=jalview.git diff --git a/src/jalview/datamodel/FeatureProperties.java b/src/jalview/datamodel/FeatureProperties.java index 8c238ef..e5ad74a 100644 --- a/src/jalview/datamodel/FeatureProperties.java +++ b/src/jalview/datamodel/FeatureProperties.java @@ -1,48 +1,49 @@ -/* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7) - * Copyright (C) 2011 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle - * - * This file is part of Jalview. - * - * Jalview is free software: you can redistribute it and/or - * modify it under the terms of the GNU General Public License - * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. - * - * Jalview is distributed in the hope that it will be useful, but - * WITHOUT ANY WARRANTY; without even the implied warranty - * of MERCHANTABILITY or FITNESS FOR A PARTICULAR - * PURPOSE. See the GNU General Public License for more details. - * - * You should have received a copy of the GNU General Public License along with Jalview. If not, see . - */ -package jalview.datamodel; - -/** - * A set of feature property constants used by jalview - * - * @author JimP - * - */ -public class FeatureProperties -{ - - public static final String EXONPOS = "exon number"; - - public static final String EXONPRODUCT = "product"; - - /** - * lookup feature type for a particular database to see if its a coding region - * feature - * - * @param dbrefsource - * @param string - * @return - */ - public static boolean isCodingFeature(String dbrefsource, String type) - { - return ((dbrefsource == null - || dbrefsource.equalsIgnoreCase(DBRefSource.EMBL) || dbrefsource - .equalsIgnoreCase(DBRefSource.EMBLCDS)) && type - .equalsIgnoreCase("CDS")); - } -} +/* + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2) + * Copyright (C) 2014 The Jalview Authors + * + * This file is part of Jalview. + * + * Jalview is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License + * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. + * + * Jalview is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty + * of MERCHANTABILITY or FITNESS FOR A PARTICULAR + * PURPOSE. See the GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License along with Jalview. If not, see . + * The Jalview Authors are detailed in the 'AUTHORS' file. + */ +package jalview.datamodel; + +/** + * A set of feature property constants used by jalview + * + * @author JimP + * + */ +public class FeatureProperties +{ + + public static final String EXONPOS = "exon number"; + + public static final String EXONPRODUCT = "product"; + + /** + * lookup feature type for a particular database to see if its a coding region + * feature + * + * @param dbrefsource + * @param string + * @return + */ + public static boolean isCodingFeature(String dbrefsource, String type) + { + return ((dbrefsource == null + || dbrefsource.equalsIgnoreCase(DBRefSource.EMBL) || dbrefsource + .equalsIgnoreCase(DBRefSource.EMBLCDS)) && type + .equalsIgnoreCase("CDS")); + } +}