X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2FSequenceGroup.java;h=7e53c46229629db5c7532baab9032245d3616ff4;hb=HEAD;hp=98371046013cb2e93c12cb083c26b3d994a7daa7;hpb=c932f0e85a8852824cdd8ce790af68682732c85c;p=jalview.git diff --git a/src/jalview/datamodel/SequenceGroup.java b/src/jalview/datamodel/SequenceGroup.java index 9837104..7e53c46 100755 --- a/src/jalview/datamodel/SequenceGroup.java +++ b/src/jalview/datamodel/SequenceGroup.java @@ -303,8 +303,9 @@ public class SequenceGroup implements AnnotatedCollectionI newannot.restrict(startRes, endRes); newannot.setSequenceRef(seqs[ipos]); newannot.adjustForAlignment(); - ContactMatrixI cm = seq.getContactMatrixFor(seq.getAnnotation()[a]); - if (cm!=null) + ContactMatrixI cm = seq + .getContactMatrixFor(seq.getAnnotation()[a]); + if (cm != null) { seqs[ipos].addContactListFor(newannot, cm); } @@ -644,7 +645,8 @@ public class SequenceGroup implements AnnotatedCollectionI } catch (java.lang.OutOfMemoryError err) { // TODO: catch OOM - jalview.bin.Console.outPrintln("Out of memory loading groups: " + err); + jalview.bin.Console + .outPrintln("Out of memory loading groups: " + err); } return upd; }