X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2Ffeatures%2FSequenceFeatures.java;fp=src%2Fjalview%2Fdatamodel%2Ffeatures%2FSequenceFeatures.java;h=905fd8b4ce4677d77a7f7db8f2ee8d0ad8c9483f;hb=5e20c0116864d77705d951e35c41a13197791156;hp=8ac4991d08fe5d6a8e0609e111e73e80d0c16245;hpb=1bad3c3f74b2e204e0d7ba93a745f5ec775c8a3e;p=jalview.git diff --git a/src/jalview/datamodel/features/SequenceFeatures.java b/src/jalview/datamodel/features/SequenceFeatures.java index 8ac4991..905fd8b 100644 --- a/src/jalview/datamodel/features/SequenceFeatures.java +++ b/src/jalview/datamodel/features/SequenceFeatures.java @@ -151,8 +151,8 @@ public class SequenceFeatures implements SequenceFeaturesI return new ArrayList<>(); } - return getAllFeatures(featureTypes.toArray(new String[featureTypes - .size()])); + return getAllFeatures( + featureTypes.toArray(new String[featureTypes.size()])); } /** @@ -320,8 +320,8 @@ public class SequenceFeatures implements SequenceFeaturesI for (Entry featureType : featureStore.entrySet()) { - Set featureGroups = featureType.getValue().getFeatureGroups( - positionalFeatures); + Set featureGroups = featureType.getValue() + .getFeatureGroups(positionalFeatures); for (String group : groups) { if (featureGroups.contains(group)) @@ -389,8 +389,9 @@ public class SequenceFeatures implements SequenceFeaturesI @Override public float getMinimumScore(String type, boolean positional) { - return featureStore.containsKey(type) ? featureStore.get(type) - .getMinimumScore(positional) : Float.NaN; + return featureStore.containsKey(type) + ? featureStore.get(type).getMinimumScore(positional) + : Float.NaN; } /** @@ -399,8 +400,9 @@ public class SequenceFeatures implements SequenceFeaturesI @Override public float getMaximumScore(String type, boolean positional) { - return featureStore.containsKey(type) ? featureStore.get(type) - .getMaximumScore(positional) : Float.NaN; + return featureStore.containsKey(type) + ? featureStore.get(type).getMaximumScore(positional) + : Float.NaN; } /** @@ -414,8 +416,7 @@ public class SequenceFeatures implements SequenceFeaturesI final boolean forwardStrand) { Collections.sort(features, - forwardStrand - ? IntervalI.COMPARE_BEGIN_ASC_END_DESC + forwardStrand ? IntervalI.COMPARE_BEGIN_ASC_END_DESC : IntervalI.COMPARE_END_DESC); }