X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fdatamodel%2Fxdb%2Funiprot%2FUniprotFeature.java;fp=src%2Fjalview%2Fdatamodel%2Fxdb%2Funiprot%2FUniprotFeature.java;h=4c2ae24594514d94a32719b964e95e9fdb9e7b0b;hb=35f830ac7246ab8560f0da4bd4c3060774253ecf;hp=b1ed27507edd9568e1f2f1486f5d99712b13b85e;hpb=576d2415673f37bb083d88e3c5702fb7d71d9b7b;p=jalview.git diff --git a/src/jalview/datamodel/xdb/uniprot/UniprotFeature.java b/src/jalview/datamodel/xdb/uniprot/UniprotFeature.java index b1ed275..4c2ae24 100644 --- a/src/jalview/datamodel/xdb/uniprot/UniprotFeature.java +++ b/src/jalview/datamodel/xdb/uniprot/UniprotFeature.java @@ -27,7 +27,11 @@ public class UniprotFeature { private String type; - private String description; + private String description = null; + + private String original = null; + + private String variation = null; private String status; @@ -47,7 +51,19 @@ public class UniprotFeature public String getDescription() { - return description; + if (description == null && variation == null && original == null) + { + return null; + } + return (description == null ? "" : description) + + (variation != null + ? (description != null ? " " : "") + "Variation: '" + + variation + "'" + : "") + + (original != null + ? ((description != null || variation != null) ? " " + : "") + "Original: '" + original + "'" + : ""); } public void setDescription(String d) @@ -95,4 +111,24 @@ public class UniprotFeature this.begin = p; this.end = p; } + + public String getOriginal() + { + return original; + } + + public void setOriginal(String original) + { + this.original = original; + } + + public String getVariation() + { + return variation; + } + + public void setVariation(String variant) + { + this.variation = variant; + } }