X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fext%2Fensembl%2FEnsemblGene.java;fp=src%2Fjalview%2Fext%2Fensembl%2FEnsemblGene.java;h=45e8e345a2416e4b6ff39a56c38cdf87096e0032;hb=f5ddcb62310a9f32545231d0c5e1d7c364bfbb53;hp=f975ac8b7b214460c54a8db7fa08c41a14d9c93b;hpb=f5008d37d1e5ca9a3b4f7e1ee2988d1c9d361f9d;p=jalview.git

diff --git a/src/jalview/ext/ensembl/EnsemblGene.java b/src/jalview/ext/ensembl/EnsemblGene.java
index f975ac8..45e8e34 100644
--- a/src/jalview/ext/ensembl/EnsemblGene.java
+++ b/src/jalview/ext/ensembl/EnsemblGene.java
@@ -429,7 +429,7 @@ public class EnsemblGene extends EnsemblSeqProxy
   protected void mapTranscriptToChromosome(Sequence transcript,
           SequenceI gene, MapList mapping)
   {
-    GeneLoci loci = ((Sequence) gene).getGeneLoci();
+    GeneLoci loci = gene.getGeneLoci();
     if (loci == null)
     {
       return;
@@ -448,8 +448,9 @@ public class EnsemblGene extends EnsemblSeqProxy
 
     List<int[]> exons = mapping.getFromRanges();
     List<int[]> transcriptLoci = new ArrayList<>();
-    
-    for (int[] exon : exons) {
+
+    for (int[] exon : exons)
+    {
       transcriptLoci.add(geneMapping.locateInTo(exon[0], exon[1]));
     }