X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fext%2Fensembl%2FEnsemblSeqProxy.java;fp=src%2Fjalview%2Fext%2Fensembl%2FEnsemblSeqProxy.java;h=b22b9c7156c0ae63734de8dfe2f1068532c92f3c;hb=2d2853c51b3fd43918112e4f9a65bdcdcc2e43a5;hp=001e18e73d2f7a6d9526091ab041d6f05c94c61d;hpb=83642b44f7e3ba17c202113a435d72a0e2d9118b;p=jalview.git

diff --git a/src/jalview/ext/ensembl/EnsemblSeqProxy.java b/src/jalview/ext/ensembl/EnsemblSeqProxy.java
index 001e18e..b22b9c7 100644
--- a/src/jalview/ext/ensembl/EnsemblSeqProxy.java
+++ b/src/jalview/ext/ensembl/EnsemblSeqProxy.java
@@ -724,18 +724,6 @@ public abstract class EnsemblSeqProxy extends EnsemblRestClient
     String comp = complement.toString();
     sf.setValue(Gff3Helper.ALLELES, comp);
     sf.setDescription(comp);
-
-    /*
-     * replace value of "alleles=" in sf.ATTRIBUTES as well
-     * so 'output as GFF' shows reverse complement alleles
-     */
-    String atts = sf.getAttributes();
-    if (atts != null)
-    {
-      atts = atts.replace(Gff3Helper.ALLELES + "=" + alleles,
-              Gff3Helper.ALLELES + "=" + comp);
-      sf.setAttributes(atts);
-    }
   }
 
   /**