X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fext%2Fensembl%2FEnsemblSequenceFetcher.java;fp=src%2Fjalview%2Fext%2Fensembl%2FEnsemblSequenceFetcher.java;h=2008fb6aeebf58e5956623d0e0e60cc848f71da8;hb=586ade46bdcd05ff028a1cff82c3c527326d28ec;hp=7454eb627cff9b5bbb76910c3083b1a7e753840a;hpb=adcef27f5747b4e70e89a56c3735bc3afb8ce9bf;p=jalview.git diff --git a/src/jalview/ext/ensembl/EnsemblSequenceFetcher.java b/src/jalview/ext/ensembl/EnsemblSequenceFetcher.java index 7454eb6..2008fb6 100644 --- a/src/jalview/ext/ensembl/EnsemblSequenceFetcher.java +++ b/src/jalview/ext/ensembl/EnsemblSequenceFetcher.java @@ -23,6 +23,7 @@ package jalview.ext.ensembl; import jalview.analysis.AlignmentUtils; import jalview.bin.Cache; import jalview.datamodel.DBRefSource; +import jalview.util.Platform; import jalview.ws.seqfetcher.DbSourceProxyImpl; import com.stevesoft.pat.Regex; @@ -50,7 +51,7 @@ abstract class EnsemblSequenceFetcher extends DbSourceProxyImpl * or ENSMUSP or similar for other species * or CCDSnnnnn.nn with at least 3 digits */ - private static final Regex ACCESSION_REGEX = new Regex( + private static final Regex ACCESSION_REGEX = Platform.newRegex( "(ENS([A-Z]{3}|)[GTEP]{1}[0-9]{11}$)" + "|" + "(CCDS[0-9.]{3,}$)");