X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fext%2Fensembl%2FEnsemblSymbol.java;fp=src%2Fjalview%2Fext%2Fensembl%2FEnsemblSymbol.java;h=40860d26ca8fd0183772f1a113e75ef568b6984e;hb=53c54d0ada46fa839095ace36e18e30ddcf63aa0;hp=40d6cadef74a30ecc7bb81db26612c2bac0e279c;hpb=eb18fbe86d8a42079f82f96791695e9ca24f3be5;p=jalview.git diff --git a/src/jalview/ext/ensembl/EnsemblSymbol.java b/src/jalview/ext/ensembl/EnsemblSymbol.java index 40d6cad..40860d2 100644 --- a/src/jalview/ext/ensembl/EnsemblSymbol.java +++ b/src/jalview/ext/ensembl/EnsemblSymbol.java @@ -44,6 +44,7 @@ public class EnsemblSymbol extends EnsemblXref { private static final String GENE = "gene"; private static final String TYPE = "type"; + /** * Constructor given the target domain to fetch data from * @@ -51,9 +52,9 @@ public class EnsemblSymbol extends EnsemblXref * @param dbName * @param dbVersion */ - public EnsemblSymbol(String domain, String dbName, String dbVersion) + public EnsemblSymbol(String dbName, String dbVersion) { - super(domain, dbName, dbVersion); + super(dbName, dbVersion); } /** @@ -131,8 +132,8 @@ public class EnsemblSymbol extends EnsemblXref */ public List getGeneIds(String identifier) { - List result = new ArrayList(); - List ids = new ArrayList(); + List result = new ArrayList<>(); + List ids = new ArrayList<>(); ids.add(identifier); String[] queries = identifier.split(getAccessionSeparator());