X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FAppJmol.java;h=a1846bc75695384dbd950a69c3353da00dda744e;hb=e1767448d422ab26a6920bae2173804eda662e31;hp=e497d1ad40b856c30095eda46fe943d4ecd18374;hpb=e5ff23b5bf5882361505c6f07846d1b8e1051e37;p=jalview.git diff --git a/src/jalview/gui/AppJmol.java b/src/jalview/gui/AppJmol.java index e497d1a..a1846bc 100644 --- a/src/jalview/gui/AppJmol.java +++ b/src/jalview/gui/AppJmol.java @@ -398,6 +398,7 @@ public class AppJmol extends StructureViewerBase MessageManager.getString("label.all")); menuItem.addActionListener(new ActionListener() { + @Override public void actionPerformed(ActionEvent evt) { allChainsSelected = true; @@ -420,6 +421,7 @@ public class AppJmol extends StructureViewerBase menuItem = new JCheckBoxMenuItem(chain, true); menuItem.addItemListener(new ItemListener() { + @Override public void itemStateChanged(ItemEvent evt) { if (!allChainsSelected) @@ -452,6 +454,7 @@ public class AppJmol extends StructureViewerBase jmb.centerViewer(toshow); } + @Override public void closeViewer(boolean closeExternalViewer) { // Jmol does not use an external viewer @@ -468,6 +471,7 @@ public class AppJmol extends StructureViewerBase jmb = null; } + @Override public void run() { _started = true; @@ -631,6 +635,7 @@ public class AppJmol extends StructureViewerBase { javax.swing.SwingUtilities.invokeLater(new Runnable() { + @Override public void run() { if (jmb.viewer.isScriptExecuting()) @@ -753,20 +758,20 @@ public class AppJmol extends StructureViewerBase { im = new jalview.util.ImageMaker(this, jalview.util.ImageMaker.TYPE.PNG, "Make PNG image from view", - width, height, null, null); + width, height, null, null, null, 0, false); } else if (type == jalview.util.ImageMaker.TYPE.EPS) { im = new jalview.util.ImageMaker(this, jalview.util.ImageMaker.TYPE.EPS, "Make EPS file from view", - width, height, null, this.getTitle()); + width, height, null, this.getTitle(), null, 0, false); } else { im = new jalview.util.ImageMaker(this, jalview.util.ImageMaker.TYPE.SVG, "Make SVG file from PCA", - width, height, null, this.getTitle()); + width, height, null, this.getTitle(), null, 0, false); } if (im.getGraphics() != null) @@ -1070,6 +1075,7 @@ public class AppJmol extends StructureViewerBase } + @Override public void setJalviewColourScheme(ColourSchemeI ucs) { jmb.setJalviewColourScheme(ucs);