X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FAppJmol.java;h=df7f43c183f64efb0cb491dc651f6b25c5f8bf32;hb=c0aaf84826ff25d510846bd1099e10809c4df711;hp=a4fe27c6e968e99ff34e17a0d7010ec61e2238cd;hpb=31f1b88951cc5ff3aea7ae0bc1a9d8fbdd264ea3;p=jalview.git

diff --git a/src/jalview/gui/AppJmol.java b/src/jalview/gui/AppJmol.java
index a4fe27c..df7f43c 100644
--- a/src/jalview/gui/AppJmol.java
+++ b/src/jalview/gui/AppJmol.java
@@ -938,7 +938,7 @@ public class AppJmol extends StructureViewerBase
       // Set the colour using the current view for the associated alignframe
       for (AlignmentPanel ap : _colourwith)
       {
-        jmb.colourBySequence(ap.av.showSequenceFeatures, ap);
+        jmb.colourBySequence(ap.av.isShowSequenceFeatures(), ap);
       }
     }
   }