X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FAppJmolBinding.java;fp=src%2Fjalview%2Fgui%2FAppJmolBinding.java;h=546890e408b344b4393d5819e42dde1dc90f1cda;hb=c3b8fbc19c04c2daec702a2bffdfab5d10555143;hp=1c54a5e35d1728e516c122e9016adb5197147f8d;hpb=24667da19e50bd3c663c7b26a1a861568aa0229f;p=jalview.git diff --git a/src/jalview/gui/AppJmolBinding.java b/src/jalview/gui/AppJmolBinding.java index 1c54a5e..546890e 100644 --- a/src/jalview/gui/AppJmolBinding.java +++ b/src/jalview/gui/AppJmolBinding.java @@ -41,10 +41,9 @@ public class AppJmolBinding extends JalviewJmolBinding private FeatureRenderer fr = null; public AppJmolBinding(AppJmol appJmol, StructureSelectionManager sSm, - PDBEntry[] pdbentry, SequenceI[][] sequenceIs, String[][] chains, - String protocol) + PDBEntry[] pdbentry, SequenceI[][] sequenceIs, String protocol) { - super(sSm, pdbentry, sequenceIs, chains, protocol); + super(sSm, pdbentry, sequenceIs, protocol); appJmolWindow = appJmol; } @@ -113,6 +112,7 @@ public class AppJmolBinding extends JalviewJmolBinding // appJmolWindow.repaint(); javax.swing.SwingUtilities.invokeLater(new Runnable() { + @Override public void run() { appJmolWindow.updateTitleAndMenus(); @@ -121,6 +121,7 @@ public class AppJmolBinding extends JalviewJmolBinding }); } + @Override public void updateColours(Object source) { AlignmentPanel ap = (AlignmentPanel) source; @@ -144,6 +145,7 @@ public class AppJmolBinding extends JalviewJmolBinding // msWalltime); } + @Override public void showUrl(String url) { showUrl(url, "jmol");