X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FAppVarna.java;h=f4a4f4da57663fb82ed5f019ade540b2c25ef856;hb=4d7f98a6dd54d9863ba449ec79dcd95d25ed863d;hp=99bcff41bcd6a9bd02ebee5e087321cc76ffa42c;hpb=619cc880371f3228e6a1fb33c6bfb6e7a7e2622c;p=jalview.git

diff --git a/src/jalview/gui/AppVarna.java b/src/jalview/gui/AppVarna.java
index 99bcff4..f4a4f4d 100644
--- a/src/jalview/gui/AppVarna.java
+++ b/src/jalview/gui/AppVarna.java
@@ -64,8 +64,8 @@ public class AppVarna extends JInternalFrame implements SelectionListener,
         SecondaryStructureListener, InterfaceVARNASelectionListener,
         VamsasSource
 {
-  private static final byte[] PAIRS = new byte[]
-  { '(', ')', '[', ']', '{', '}', '<', '>' };
+  private static final byte[] PAIRS = new byte[] { '(', ')', '[', ']', '{',
+      '}', '<', '>' };
 
   private AppVarnaBinding vab;
 
@@ -181,8 +181,7 @@ public class AppVarna extends JInternalFrame implements SelectionListener,
     String theTitle = sname
             + (aa.sequenceRef == null ? " trimmed to " + seq.getName() : "");
     theTitle = MessageManager.formatMessage("label.varna_params",
-            new String[]
-            { theTitle });
+            new String[] { theTitle });
     setTitle(theTitle);
 
     String gappedTitle = sname + " (with gaps)";
@@ -195,7 +194,6 @@ public class AppVarna extends JInternalFrame implements SelectionListener,
     vab.setSelectedIndex(0);
   }
 
-
   /**
    * Constructor that links the viewer to a parent panel (but has no structures
    * yet - use addModel to add them)
@@ -677,7 +675,6 @@ public class AppVarna extends JInternalFrame implements SelectionListener,
     vab.setSelectedIndex(selectedIndex);
   }
 
-
   /**
    * Add a model with associated Varna session file
    * 
@@ -716,7 +713,6 @@ public class AppVarna extends JInternalFrame implements SelectionListener,
     }
   }
 
-
   /**
    * Replace everything except RNA secondary structure characters with a period
    *