X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FFeatureColourChooser.java;fp=src%2Fjalview%2Fgui%2FFeatureColourChooser.java;h=a1c1bfffe0b3f6ffb49b9616052ad8102b501504;hb=0ae197277308506be79cee82d872e08cecd64021;hp=5594e1adec0f2a0e39701e0ced810c3ebc4cb4e6;hpb=ddbcb3e33e1a8d4c644472cfa3d28b193da97064;p=jalview.git

diff --git a/src/jalview/gui/FeatureColourChooser.java b/src/jalview/gui/FeatureColourChooser.java
index 5594e1a..a1c1bff 100644
--- a/src/jalview/gui/FeatureColourChooser.java
+++ b/src/jalview/gui/FeatureColourChooser.java
@@ -178,9 +178,10 @@ public class FeatureColourChooser extends JalviewDialog
       // initialise threshold slider and selector
       threshold.setSelectedIndex(cs.isAboveThreshold() ? 1 : 2);
       slider.setEnabled(true);
+      slider.setValue((int) (cs.getThreshold() * scaleFactor));
       thresholdValue.setEnabled(true);
       threshline = new GraphLine((max - min) / 2f, "Threshold", Color.black);
-
+      threshline.value = cs.getThreshold();
     }
 
     adjusting = false;