X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FJalviewChimeraBindingModel.java;fp=src%2Fjalview%2Fgui%2FJalviewChimeraBindingModel.java;h=78ab68d8c3fe195d201b86cabc3d47eab8eaa769;hb=c3b8fbc19c04c2daec702a2bffdfab5d10555143;hp=7a54732a0489dca6a5feaebaa03dd56295774d6b;hpb=24667da19e50bd3c663c7b26a1a861568aa0229f;p=jalview.git diff --git a/src/jalview/gui/JalviewChimeraBindingModel.java b/src/jalview/gui/JalviewChimeraBindingModel.java index 7a54732..78ab68d 100644 --- a/src/jalview/gui/JalviewChimeraBindingModel.java +++ b/src/jalview/gui/JalviewChimeraBindingModel.java @@ -32,11 +32,12 @@ public class JalviewChimeraBindingModel extends JalviewChimeraBinding private FeatureRenderer fr = null; + public JalviewChimeraBindingModel(ChimeraViewFrame chimeraViewFrame, StructureSelectionManager ssm, PDBEntry[] pdbentry, - SequenceI[][] sequenceIs, String[][] chains, String protocol) + SequenceI[][] sequenceIs, String protocol) { - super(ssm, pdbentry, sequenceIs, chains, protocol); + super(ssm, pdbentry, sequenceIs, protocol); cvf = chimeraViewFrame; } @@ -72,6 +73,7 @@ public class JalviewChimeraBindingModel extends JalviewChimeraBinding { javax.swing.SwingUtilities.invokeLater(new Runnable() { + @Override public void run() { cvf.updateTitleAndMenus(); @@ -80,6 +82,7 @@ public class JalviewChimeraBindingModel extends JalviewChimeraBinding }); } + @Override public void updateColours(Object source) { AlignmentPanel ap = (AlignmentPanel) source; @@ -113,6 +116,7 @@ public class JalviewChimeraBindingModel extends JalviewChimeraBinding * Send an asynchronous command to Chimera, in a new thread, optionally with * an 'in progress' message in a progress bar somewhere */ + @Override protected void sendAsynchronousCommand(final String command, final String progressMsg) { @@ -135,4 +139,6 @@ public class JalviewChimeraBindingModel extends JalviewChimeraBinding thread.start(); } + + }