X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FOverviewPanel.java;h=9d0a55da93a501d6bc1eee4ecdd6632d8ab2baf2;hb=5010b95e8e250e744eefc5a1c976d70c044be32f;hp=af80725ee6a5b97d5e8c309750d7475eade3239f;hpb=d221d910aad1d44bbc2e0a1f7ac44f5ceb575018;p=jalview.git diff --git a/src/jalview/gui/OverviewPanel.java b/src/jalview/gui/OverviewPanel.java index af80725..9d0a55d 100755 --- a/src/jalview/gui/OverviewPanel.java +++ b/src/jalview/gui/OverviewPanel.java @@ -20,6 +20,7 @@ */ package jalview.gui; +import jalview.bin.Cache; import jalview.renderer.OverviewRenderer; import jalview.util.MessageManager; import jalview.util.Platform; @@ -39,8 +40,10 @@ import java.awt.event.MouseAdapter; import java.awt.event.MouseEvent; import java.awt.event.MouseMotionAdapter; import java.beans.PropertyChangeEvent; +import java.beans.PropertyVetoException; import javax.swing.JCheckBoxMenuItem; +import javax.swing.JInternalFrame; import javax.swing.JPanel; import javax.swing.JPopupMenu; import javax.swing.SwingUtilities; @@ -52,8 +55,8 @@ import javax.swing.SwingUtilities; * @author $author$ * @version $Revision$ */ -public class OverviewPanel extends JPanel implements Runnable, - ViewportListenerI +public class OverviewPanel extends JPanel + implements Runnable, ViewportListenerI { private OverviewDimensions od; @@ -82,30 +85,62 @@ public class OverviewPanel extends JPanel implements Runnable, this.av = alPanel.av; this.ap = alPanel; - od = new OverviewDimensionsShowHidden(av.getRanges(), - (av.isShowAnnotation() && av - .getAlignmentConservationAnnotation() != null)); - - setSize(od.getWidth(), od.getHeight()); + showHidden = Cache.getDefault(Preferences.SHOW_OV_HIDDEN_AT_START, + false); + if (showHidden) + { + od = new OverviewDimensionsShowHidden(av.getRanges(), + (av.isShowAnnotation() + && av.getAlignmentConservationAnnotation() != null)); + } + else + { + od = new OverviewDimensionsHideHidden(av.getRanges(), + (av.isShowAnnotation() + && av.getAlignmentConservationAnnotation() != null)); + } setLayout(new BorderLayout()); progressPanel = new ProgressPanel(OverviewRenderer.UPDATE, - MessageManager.getString("label.oview_calc")); + MessageManager.getString("label.oview_calc"), getWidth()); this.add(progressPanel, BorderLayout.SOUTH); oviewCanvas = new OverviewCanvas(od, av, progressPanel); add(oviewCanvas, BorderLayout.CENTER); - av.getRanges().addPropertyChangeListener(this); + // without this the overview window does not size to fit the overview canvas + setPreferredSize(new Dimension(od.getWidth(), od.getHeight())); + addComponentListener(new ComponentAdapter() { @Override public void componentResized(ComponentEvent evt) { - updateOverviewImage(); + // Resize is called on the initial display of the overview. + // This code adjusts sizes to account for the progress bar if it has not + // already been accounted for, which triggers another resize call for + // the correct sizing, at which point the overview image is updated. + // (This avoids a double recalculation of the image.) + if (getWidth() == od.getWidth() && getHeight() == od.getHeight() + + progressPanel.getHeight()) + { + updateOverviewImage(); + } + else + { + if ((getWidth() > 0) && (getHeight() > 0)) + { + od.setWidth(getWidth()); + od.setHeight(getHeight() - progressPanel.getHeight()); + } + + setPreferredSize(new Dimension(od.getWidth(), + od.getHeight() + progressPanel.getHeight())); + } } + }); addMouseMotionListener(new MouseMotionAdapter() @@ -119,15 +154,15 @@ public class OverviewPanel extends JPanel implements Runnable, { // set the mouse position as a fixed point in the box // and drag relative to that position - od.adjustViewportFromMouse(evt.getX(), - evt.getY(), av.getAlignment().getHiddenSequences(), + od.adjustViewportFromMouse(evt.getX(), evt.getY(), + av.getAlignment().getHiddenSequences(), av.getAlignment().getHiddenColumns()); } else { - od.updateViewportFromMouse(evt.getX(), evt.getY(), av - .getAlignment().getHiddenSequences(), av.getAlignment() - .getHiddenColumns()); + od.updateViewportFromMouse(evt.getX(), evt.getY(), + av.getAlignment().getHiddenSequences(), + av.getAlignment().getHiddenColumns()); } } } @@ -137,15 +172,21 @@ public class OverviewPanel extends JPanel implements Runnable, { if (od.isPositionInBox(evt.getX(), evt.getY())) { - // display drag cursor at mouse position - setCursor(Cursor.getPredefinedCursor(Cursor.MOVE_CURSOR)); + /* + * using HAND_CURSOR rather than DRAG_CURSOR + * as the latter is not supported on Mac + */ + getParent().setCursor( + Cursor.getPredefinedCursor(Cursor.HAND_CURSOR)); } else { // reset cursor - setCursor(Cursor.getPredefinedCursor(Cursor.DEFAULT_CURSOR)); + getParent().setCursor( + Cursor.getPredefinedCursor(Cursor.CROSSHAIR_CURSOR)); } } + }); addMouseListener(new MouseAdapter() @@ -161,16 +202,22 @@ public class OverviewPanel extends JPanel implements Runnable, } } else - // if (!av.getWrapAlignment()) { + // don't do anything if the mouse press is in the overview's box + // (wait to see if it's a drag instead) + // otherwise update the viewport if (!od.isPositionInBox(evt.getX(), evt.getY())) { - // don't do anything if the mouse press is in the overview's box - // (wait to see if it's a drag instead) - // otherwise update the viewport + draggingBox = false; + + // display drag cursor at mouse position + setCursor(Cursor.getPredefinedCursor(Cursor.MOVE_CURSOR)); + od.updateViewportFromMouse(evt.getX(), evt.getY(), av.getAlignment().getHiddenSequences(), av.getAlignment().getHiddenColumns()); + getParent().setCursor( + Cursor.getPredefinedCursor(Cursor.HAND_CURSOR)); } else { @@ -183,25 +230,21 @@ public class OverviewPanel extends JPanel implements Runnable, } @Override - public void mouseReleased(MouseEvent evt) + public void mouseClicked(MouseEvent evt) { - if (draggingBox) + if (SwingUtilities.isRightMouseButton(evt)) { - draggingBox = false; + showPopupMenu(evt); } } @Override - public void mouseClicked(MouseEvent evt) + public void mouseReleased(MouseEvent evt) { - if (SwingUtilities.isRightMouseButton(evt)) - { - showPopupMenu(evt); - } + draggingBox = false; } - }); - updateOverviewImage(); + }); } /* @@ -238,15 +281,15 @@ public class OverviewPanel extends JPanel implements Runnable, { showHidden = false; od = new OverviewDimensionsHideHidden(av.getRanges(), - (av.isShowAnnotation() && av - .getAlignmentConservationAnnotation() != null)); + (av.isShowAnnotation() + && av.getAlignmentConservationAnnotation() != null)); } else { showHidden = true; od = new OverviewDimensionsShowHidden(av.getRanges(), - (av.isShowAnnotation() && av - .getAlignmentConservationAnnotation() != null)); + (av.isShowAnnotation() + && av.getAlignmentConservationAnnotation() != null)); } oviewCanvas.resetOviewDims(od); updateOverviewImage(); @@ -269,18 +312,17 @@ public class OverviewPanel extends JPanel implements Runnable, if ((getWidth() > 0) && (getHeight() > 0)) { od.setWidth(getWidth()); - od.setHeight(getHeight()); + od.setHeight(getHeight() - progressPanel.getHeight()); } - setPreferredSize(new Dimension(od.getWidth(), od.getHeight())); + setPreferredSize(new Dimension(od.getWidth(), + od.getHeight() + progressPanel.getHeight())); if (oviewCanvas.restartDraw()) { return; } - // oviewCanvas.addPropertyChangeListener(OverviewRenderer.UPDATE, this); - Thread thread = new Thread(this); thread.start(); repaint(); @@ -291,11 +333,14 @@ public class OverviewPanel extends JPanel implements Runnable, @Override public void run() { - oviewCanvas.draw(av.isShowSequenceFeatures(), - (av.isShowAnnotation() && av - .getAlignmentConservationAnnotation() != null), ap - .getSeqPanel().seqCanvas.getFeatureRenderer()); - setBoxPosition(); + if (oviewCanvas != null) + { + oviewCanvas.draw(av.isShowSequenceFeatures(), + (av.isShowAnnotation() + && av.getAlignmentConservationAnnotation() != null), + ap.getSeqPanel().seqCanvas.getFeatureRenderer()); + setBoxPosition(); + } } /** @@ -303,17 +348,36 @@ public class OverviewPanel extends JPanel implements Runnable, * changed * */ + private void setBoxPositionOnly() + { + if (od != null) + { + int oldX = od.getBoxX(); + int oldY = od.getBoxY(); + int oldWidth = od.getBoxWidth(); + int oldHeight = od.getBoxHeight(); + od.setBoxPosition(av.getAlignment().getHiddenSequences(), + av.getAlignment().getHiddenColumns()); + repaint(oldX - 1, oldY - 1, oldWidth + 2, oldHeight + 2); + repaint(od.getBoxX(), od.getBoxY(), od.getBoxWidth(), + od.getBoxHeight()); + } + } + private void setBoxPosition() { - od.setBoxPosition(av.getAlignment().getHiddenSequences(), av - .getAlignment().getHiddenColumns()); - repaint(); + if (od != null) + { + od.setBoxPosition(av.getAlignment().getHiddenSequences(), + av.getAlignment().getHiddenColumns()); + repaint(); + } } @Override public void propertyChange(PropertyChangeEvent evt) { - setBoxPosition(); + setBoxPositionOnly(); } /** @@ -323,7 +387,22 @@ public class OverviewPanel extends JPanel implements Runnable, { try { - av.getRanges().removePropertyChangeListener(this); + if (av != null) + { + av.getRanges().removePropertyChangeListener(this); + } + + oviewCanvas.dispose(); + + /* + * close the parent frame (which also removes it from the + * Desktop Windows menu) + */ + ((JInternalFrame) SwingUtilities.getAncestorOfClass( + JInternalFrame.class, (this))).setClosed(true); + } catch (PropertyVetoException e) + { + // ignore } finally { progressPanel = null; @@ -333,32 +412,4 @@ public class OverviewPanel extends JPanel implements Runnable, od = null; } } - - /* private void addProgressBar() - { - progressPanel = new JPanel(new BorderLayout(10, 0)); - progressPanel.setBorder(new EmptyBorder(0, 3, 0, 20)); - - this.add(progressPanel, BorderLayout.SOUTH); - - progressBar = new OvProgressBar(); - progressBar.setMinimum(0); - - progressPanel.add(new JLabel("Recalculating overview..."), - BorderLayout.WEST); - progressPanel.add(progressBar, BorderLayout.CENTER); - } - - private void removeProgressBar() - { - if (progressPanel != null) - { - synchronized (progressPanel) - { - progressPanel.remove(progressBar); - this.remove(progressPanel); - progressPanel = null; - } - } - }*/ }