X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FPCAPanel.java;fp=src%2Fjalview%2Fgui%2FPCAPanel.java;h=47add28340fe8d29e98b8bd256e1dadea7be8284;hb=e1767448d422ab26a6920bae2173804eda662e31;hp=b6e5b9478cf7fab048ac874d787ddd3c0ef0e2fc;hpb=e5ff23b5bf5882361505c6f07846d1b8e1051e37;p=jalview.git

diff --git a/src/jalview/gui/PCAPanel.java b/src/jalview/gui/PCAPanel.java
index b6e5b94..47add28 100644
--- a/src/jalview/gui/PCAPanel.java
+++ b/src/jalview/gui/PCAPanel.java
@@ -167,6 +167,7 @@ public class PCAPanel extends GPCAPanel implements Runnable,
     }
   }
 
+  @Override
   public void bgcolour_actionPerformed(ActionEvent e)
   {
     Color col = JColorChooser.showDialog(this,
@@ -183,6 +184,7 @@ public class PCAPanel extends GPCAPanel implements Runnable,
   /**
    * DOCUMENT ME!
    */
+  @Override
   public void run()
   {
     long progId = System.currentTimeMillis();
@@ -288,6 +290,7 @@ public class PCAPanel extends GPCAPanel implements Runnable,
    * @param e
    *          DOCUMENT ME!
    */
+  @Override
   protected void xCombobox_actionPerformed(ActionEvent e)
   {
     doDimensionChange();
@@ -299,6 +302,7 @@ public class PCAPanel extends GPCAPanel implements Runnable,
    * @param e
    *          DOCUMENT ME!
    */
+  @Override
   protected void yCombobox_actionPerformed(ActionEvent e)
   {
     doDimensionChange();
@@ -310,11 +314,13 @@ public class PCAPanel extends GPCAPanel implements Runnable,
    * @param e
    *          DOCUMENT ME!
    */
+  @Override
   protected void zCombobox_actionPerformed(ActionEvent e)
   {
     doDimensionChange();
   }
 
+  @Override
   public void outputValues_actionPerformed(ActionEvent e)
   {
     CutAndPasteTransfer cap = new CutAndPasteTransfer();
@@ -330,17 +336,20 @@ public class PCAPanel extends GPCAPanel implements Runnable,
     }
   }
 
+  @Override
   public void showLabels_actionPerformed(ActionEvent e)
   {
     rc.showLabels(showLabels.getState());
   }
 
+  @Override
   public void print_actionPerformed(ActionEvent e)
   {
     PCAPrinter printer = new PCAPrinter();
     printer.start();
   }
 
+  @Override
   public void originalSeqData_actionPerformed(ActionEvent e)
   {
     // this was cut'n'pasted from the equivalent TreePanel method - we should
@@ -414,6 +423,7 @@ public class PCAPanel extends GPCAPanel implements Runnable,
 
   class PCAPrinter extends Thread implements Printable
   {
+    @Override
     public void run()
     {
       PrinterJob printJob = PrinterJob.getPrinterJob();
@@ -433,6 +443,7 @@ public class PCAPanel extends GPCAPanel implements Runnable,
       }
     }
 
+    @Override
     public int print(Graphics pg, PageFormat pf, int pi)
             throws PrinterException
     {
@@ -462,6 +473,7 @@ public class PCAPanel extends GPCAPanel implements Runnable,
    * @param e
    *          DOCUMENT ME!
    */
+  @Override
   public void eps_actionPerformed(ActionEvent e)
   {
     makePCAImage(jalview.util.ImageMaker.TYPE.EPS);
@@ -473,6 +485,7 @@ public class PCAPanel extends GPCAPanel implements Runnable,
    * @param e
    *          DOCUMENT ME!
    */
+  @Override
   public void png_actionPerformed(ActionEvent e)
   {
     makePCAImage(jalview.util.ImageMaker.TYPE.PNG);
@@ -489,19 +502,19 @@ public class PCAPanel extends GPCAPanel implements Runnable,
     {
       im = new jalview.util.ImageMaker(this,
               jalview.util.ImageMaker.TYPE.PNG, "Make PNG image from PCA",
-              width, height, null, null);
+              width, height, null, null, null, 0, false);
     }
     else if (type == jalview.util.ImageMaker.TYPE.EPS)
     {
       im = new jalview.util.ImageMaker(this,
               jalview.util.ImageMaker.TYPE.EPS, "Make EPS file from PCA",
-              width, height, null, this.getTitle());
+              width, height, null, this.getTitle(), null, 0, false);
     }
     else
     {
       im = new jalview.util.ImageMaker(this,
               jalview.util.ImageMaker.TYPE.SVG, "Make SVG file from PCA",
-              width, height, null, this.getTitle());
+              width, height, null, this.getTitle(), null, 0, false);
 
     }
 
@@ -517,6 +530,7 @@ public class PCAPanel extends GPCAPanel implements Runnable,
     }
   }
 
+  @Override
   public void viewMenu_menuSelected()
   {
     buildAssociatedViewMenu();
@@ -552,6 +566,7 @@ public class PCAPanel extends GPCAPanel implements Runnable,
       buttonGroup.add(item);
       item.addActionListener(new ActionListener()
       {
+        @Override
         public void actionPerformed(ActionEvent evt)
         {
           rc.applyToAllViews = false;
@@ -571,6 +586,7 @@ public class PCAPanel extends GPCAPanel implements Runnable,
     itemf.setSelected(rc.applyToAllViews);
     itemf.addActionListener(new ActionListener()
     {
+      @Override
       public void actionPerformed(ActionEvent evt)
       {
         rc.applyToAllViews = itemf.isSelected();
@@ -587,6 +603,7 @@ public class PCAPanel extends GPCAPanel implements Runnable,
    * jalview.jbgui.GPCAPanel#outputPoints_actionPerformed(java.awt.event.ActionEvent
    * )
    */
+  @Override
   protected void outputPoints_actionPerformed(ActionEvent e)
   {
     CutAndPasteTransfer cap = new CutAndPasteTransfer();
@@ -612,6 +629,7 @@ public class PCAPanel extends GPCAPanel implements Runnable,
    * jalview.jbgui.GPCAPanel#outputProjPoints_actionPerformed(java.awt.event
    * .ActionEvent)
    */
+  @Override
   protected void outputProjPoints_actionPerformed(ActionEvent e)
   {
     CutAndPasteTransfer cap = new CutAndPasteTransfer();