X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FPopupMenu.java;h=d44ecdfd911823469b1f99a2d7b26f648e83e856;hb=362f2db1b01f3562784864a1d6ac5f7b9be0a18a;hp=07fdeea1e62004f24336dcebf834a65e4bbf14e5;hpb=57dc00f8b62b404e14bd7e689ecc510ab24aeecf;p=jalview.git

diff --git a/src/jalview/gui/PopupMenu.java b/src/jalview/gui/PopupMenu.java
old mode 100755
new mode 100644
index 07fdeea..d44ecdf
--- a/src/jalview/gui/PopupMenu.java
+++ b/src/jalview/gui/PopupMenu.java
@@ -37,7 +37,7 @@ import jalview.util.UrlLink;
  * DOCUMENT ME!
  * 
  * @author $author$
- * @version $Revision$
+ * @version $Revision: 1.118 $
  */
 public class PopupMenu extends JPopupMenu
 {
@@ -1826,8 +1826,7 @@ public class PopupMenu extends JPopupMenu
 
   public void colourByStructure(String pdbid)
   {
-    Annotation[] anots = jalview.structure.StructureSelectionManager
-            .getStructureSelectionManager().colourSequenceFromStructure(
+    Annotation[] anots = ap.av.getStructureSelectionManager().colourSequenceFromStructure(
                     sequence, pdbid);
 
     AlignmentAnnotation an = new AlignmentAnnotation("Structure",