X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FScalePanel.java;fp=src%2Fjalview%2Fgui%2FScalePanel.java;h=e677769170f2823d5f35456c96624abe82be934d;hb=4687e1243f51bd09334792b8a7ce518a5aa07de7;hp=1db4051e1841e8648149326d4e72160064392c4a;hpb=7e441a4a9594821ec56539b29cb3b8a13bfa3c65;p=jalview.git

diff --git a/src/jalview/gui/ScalePanel.java b/src/jalview/gui/ScalePanel.java
index 1db4051..e677769 100755
--- a/src/jalview/gui/ScalePanel.java
+++ b/src/jalview/gui/ScalePanel.java
@@ -168,7 +168,7 @@ public class ScalePanel extends JPanel
         {
           av.showColumn(reveal[0]);
           reveal = null;
-          ap.paintAlignment(true);
+          ap.paintAlignment(true, true);
           av.sendSelection();
         }
       });
@@ -184,7 +184,7 @@ public class ScalePanel extends JPanel
           {
             av.showAllHiddenColumns();
             reveal = null;
-            ap.paintAlignment(true);
+            ap.paintAlignment(true, true);
             av.sendSelection();
           }
         });
@@ -208,7 +208,7 @@ public class ScalePanel extends JPanel
             av.setSelectionGroup(null);
           }
 
-          ap.paintAlignment(true);
+          ap.paintAlignment(true, true);
           av.sendSelection();
         }
       });
@@ -260,7 +260,7 @@ public class ScalePanel extends JPanel
       sg.setEndRes(max);
     }
     av.setSelectionGroup(sg);
-    ap.paintAlignment(false);
+    ap.paintAlignment(false, false);
     av.sendSelection();
   }
 
@@ -297,7 +297,7 @@ public class ScalePanel extends JPanel
       }
       else
       {
-        ap.paintAlignment(false);
+        ap.paintAlignment(false, false);
       }
       return;
     }
@@ -316,7 +316,7 @@ public class ScalePanel extends JPanel
       }
     }
     stretchingGroup = false;
-    ap.paintAlignment(false);
+    ap.paintAlignment(false, false);
     av.sendSelection();
   }
 
@@ -346,7 +346,7 @@ public class ScalePanel extends JPanel
     {
       stretchingGroup = true;
       cs.stretchGroup(res, sg, min, max);
-      ap.paintAlignment(false);
+      ap.paintAlignment(false, false);
     }
   }