X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FSequenceFetcher.java;fp=src%2Fjalview%2Fgui%2FSequenceFetcher.java;h=c330a922faeea7ab82916585cfc4876e8d842882;hb=5882e58cfd12524e14fb6d84264a3ff63a4ff29d;hp=dd25532928994d3b2da68c50e33bb366b51b53ae;hpb=f3b9ee1c57282a1233ffec89ec5aae39dc29d25f;p=jalview.git diff --git a/src/jalview/gui/SequenceFetcher.java b/src/jalview/gui/SequenceFetcher.java index dd25532..c330a92 100755 --- a/src/jalview/gui/SequenceFetcher.java +++ b/src/jalview/gui/SequenceFetcher.java @@ -20,6 +20,18 @@ */ package jalview.gui; +import jalview.datamodel.AlignmentI; +import jalview.datamodel.DBRefEntry; +import jalview.datamodel.DBRefSource; +import jalview.datamodel.SequenceFeature; +import jalview.datamodel.SequenceI; +import jalview.io.FormatAdapter; +import jalview.io.IdentifyFile; +import jalview.util.DBRefUtils; +import jalview.util.MessageManager; +import jalview.ws.dbsources.das.api.DasSourceRegistryI; +import jalview.ws.seqfetcher.DbSourceProxy; + import java.awt.BorderLayout; import java.awt.Font; import java.awt.event.ActionEvent; @@ -44,19 +56,6 @@ import javax.swing.tree.DefaultMutableTreeNode; import com.stevesoft.pat.Regex; -import jalview.datamodel.Alignment; -import jalview.datamodel.AlignmentI; -import jalview.datamodel.DBRefEntry; -import jalview.datamodel.DBRefSource; -import jalview.datamodel.SequenceFeature; -import jalview.datamodel.SequenceI; -import jalview.io.FormatAdapter; -import jalview.io.IdentifyFile; -import jalview.util.DBRefUtils; -import jalview.util.MessageManager; -import jalview.ws.dbsources.das.api.DasSourceRegistryI; -import jalview.ws.seqfetcher.DbSourceProxy; - public class SequenceFetcher extends JPanel implements Runnable { JLabel dbeg = new JLabel(); @@ -774,7 +773,7 @@ public class SequenceFetcher extends JPanel implements Runnable AlignmentI parseResult(String result, String title) { String format = new IdentifyFile().Identify(result, "Paste"); - Alignment sequences = null; + AlignmentI sequences = null; if (FormatAdapter.isValidFormat(format)) { sequences = null;