X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fgui%2FSequenceRenderer.java;fp=src%2Fjalview%2Fgui%2FSequenceRenderer.java;h=fb967edde92f0503a01c399fb8e8ec8a8b93341a;hb=8946f41687f4c822ac8d15ee8551f23f156735c4;hp=81b394bd3c3ecd8ed26d73ddac2074221efd3f4a;hpb=f27f7be4c32780de615e2678f11a5e80702c5e25;p=jalview.git

diff --git a/src/jalview/gui/SequenceRenderer.java b/src/jalview/gui/SequenceRenderer.java
index 81b394b..fb967ed 100755
--- a/src/jalview/gui/SequenceRenderer.java
+++ b/src/jalview/gui/SequenceRenderer.java
@@ -30,6 +30,9 @@ import java.awt.Color;
 import java.awt.FontMetrics;
 import java.awt.Graphics;
 
+import org.jfree.graphics2d.svg.SVGGraphics2D;
+import org.jibble.epsgraphics.EpsGraphics2D;
+
 public class SequenceRenderer implements jalview.api.SequenceRenderer
 {
   final static int CHAR_TO_UPPER = 'A' - 'a';
@@ -254,8 +257,19 @@ public class SequenceRenderer implements jalview.api.SequenceRenderer
     }
     graphics.setColor(av.getTextColour());
 
-    if (monospacedFont && av.getShowText() && allGroups.length == 0
-            && !av.getColourText() && av.getThresholdTextColour() == 0)
+    boolean drawAllText = monospacedFont && av.getShowText() && allGroups.length == 0
+            && !av.getColourText() && av.getThresholdTextColour() == 0;
+
+    /*
+     * EPS or SVG misaligns monospaced strings (JAL-3239)
+     * so always draw these one character at a time
+     */
+    if (graphics instanceof EpsGraphics2D
+            || graphics instanceof SVGGraphics2D)
+    {
+      drawAllText = false;
+    }
+    if (drawAllText)
     {
       if (av.isRenderGaps())
       {