X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FAMSAFile.java;h=34eace418f27ed7921c20679d6e73fbe995a35e7;hb=74b531f56bbaad5c5e06a4744980256fe8110923;hp=798249f8e1599663969032b6aac40d0db7e0cad0;hpb=8b27085fa7fc5f2877e078421284c2636b85b8c6;p=jalview.git diff --git a/src/jalview/io/AMSAFile.java b/src/jalview/io/AMSAFile.java index 798249f..34eace4 100644 --- a/src/jalview/io/AMSAFile.java +++ b/src/jalview/io/AMSAFile.java @@ -24,6 +24,8 @@ import jalview.datamodel.AlignmentAnnotation; import jalview.datamodel.AlignmentI; import jalview.datamodel.SequenceI; +import java.io.IOException; + public class AMSAFile extends jalview.io.FastaFile { @@ -37,11 +39,23 @@ public class AMSAFile extends jalview.io.FastaFile this.al = al; } + public AMSAFile(String inFile, DataSourceType sourceType) + throws IOException + { + super(inFile, sourceType); + } + + public AMSAFile(FileParse source) throws IOException + { + super(source); + } + /** * DOCUMENT ME! * * @return DOCUMENT ME! */ + @Override public String print(SequenceI[] sqs, boolean jvsuffix) { super.print(sqs, jvsuffix);