X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FFileFormat.java;h=2ffe5775eb2a2e91597ad9bf0152bb5a1aff9ac6;hb=c794c5033adeee182b03a5ea92c0a7495a29661f;hp=cb6174015d13e2d9ebefac6736b0ad09e9d9a65a;hpb=e1dbbc5edc07f65706eeb1dda9f4c9bcdee9d3a5;p=jalview.git

diff --git a/src/jalview/io/FileFormat.java b/src/jalview/io/FileFormat.java
index cb61740..2ffe577 100644
--- a/src/jalview/io/FileFormat.java
+++ b/src/jalview/io/FileFormat.java
@@ -373,8 +373,24 @@ public enum FileFormat implements FileFormatI
     {
       return true;
     }
+  },
+  HMMER3("HMMER3", "hmm", true, true)
+  {
+    @Override
+    public AlignmentFileReaderI getReader(FileParse source)
+            throws IOException
+    {
+      return new HMMFile(source);
+    }
+
+    @Override
+    public AlignmentFileWriterI getWriter(AlignmentI al)
+    {
+      return new HMMFile();
+    }
   };
 
+
   private boolean writable;
 
   private boolean readable;