X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FJPredFile.java;h=ab2c00ad3b7cb5076cb965892e50ab8790524a76;hb=9d2408483e451285fd555c3cd6e0273977acbaa7;hp=6af92b72ea9f9efc00d79559993981c4202ee48c;hpb=214ad7e089fdf9cde66ac5e5d56d498101bbe2c3;p=jalview.git diff --git a/src/jalview/io/JPredFile.java b/src/jalview/io/JPredFile.java index 6af92b7..ab2c00a 100755 --- a/src/jalview/io/JPredFile.java +++ b/src/jalview/io/JPredFile.java @@ -25,6 +25,8 @@ */ package jalview.io; +import java.util.Locale; + import jalview.datamodel.Alignment; import jalview.datamodel.AlignmentAnnotation; import jalview.datamodel.Sequence; @@ -409,7 +411,7 @@ public class JPredFile extends AlignFile // check that no stray annotations have been added at the end. { SequenceI sq = seqs.elementAt(j - 1); - if (sq.getName().toUpperCase().startsWith("JPRED")) + if (sq.getName().toUpperCase(Locale.ROOT).startsWith("JPRED")) { annotSeqs.addElement(sq); seqs.removeElementAt(--j);