X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fio%2FJSONFile.java;fp=src%2Fjalview%2Fio%2FJSONFile.java;h=d2b8412803a06628d06a73331b6a4b7a315a74f9;hb=c75ae0da287834282173560815959c4b4e7e6b2d;hp=ff129a4317d7b26e6416dc02f956a0315ff32b61;hpb=f0658e24fa038198d566d8adfb75f0fd4915d3aa;p=jalview.git diff --git a/src/jalview/io/JSONFile.java b/src/jalview/io/JSONFile.java index ff129a4..d2b8412 100644 --- a/src/jalview/io/JSONFile.java +++ b/src/jalview/io/JSONFile.java @@ -516,15 +516,12 @@ public class JSONFile extends AlignFile implements ComplexAlignFile public void parseHiddenCols(JSONObject jvSettingsJson) { - // hiddenColumns = new ArrayList(); String hiddenCols = (String) jvSettingsJson.get("hiddenCols"); if(hiddenCols != null && !hiddenCols.isEmpty()){ columnSelection = new ColumnSelection(); String[] rangeStrings = hiddenCols.split(";"); for(String rangeString : rangeStrings){ String[] range = rangeString.split("-"); - // hiddenColumns.add(new int[] - // { Integer.valueOf(range[0]), Integer.valueOf(range[1]) }); columnSelection.hideColumns(Integer.valueOf(range[0]), Integer.valueOf(range[1])); } @@ -547,9 +544,6 @@ public class JSONFile extends AlignFile implements ComplexAlignFile String descripiton = (String) jsonFeature.get("description"); String seqRef = (String) jsonFeature.get("sequenceRef"); Float score = Float.valueOf(jsonFeature.get("score").toString()); - // Hashtable otherDetails = (Hashtable) jsonFeature - // .get("otherDetails"); - // sequenceFeature.otherDetails = otherDetails; Sequence seq = seqMap.get(seqRef); SequenceFeature sequenceFeature = new SequenceFeature();